Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC243428.1-201ENST00000421099 264 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 RPS12P2-201ENST00000439728 269 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 AC093019.1-201ENST00000443135 252 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC38Q502W7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC38Q502W7 RNU6-965P-201ENST00000516721 96 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 RNU6-667P-201ENST00000517186 102 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC38Q502W7 PRELID2P1-201ENST00000552837 301 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC38Q502W7 7SK.7-201ENST00000603504 247 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 RPL17P51-201ENST00000605218 238 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 AC009229.3-201ENST00000608056 282 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 AL137847.3-201ENST00000611521 109 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC38Q502W7 ZNF299P-201ENST00000406845 1804 ntBASIC2.67□□□□□ -1.98
CCDC38Q502W7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CCDC38Q502W7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC38Q502W7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC38Q502W7 Y_RNA.2-201ENST00000362330 96 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 Y_RNA.473-201ENST00000384333 102 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 Y_RNA.490-201ENST00000384413 102 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 Y_RNA.533-201ENST00000384596 114 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 AC105272.1-201ENST00000438604 198 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 AC011816.1-201ENST00000441346 546 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.66□□□□□ -1.98
CCDC38Q502W7 FGF7P4-201ENST00000509595 295 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 AC107222.1-201ENST00000510899 637 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 RNU6-507P-201ENST00000516045 100 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.66□□□□□ -1.98
CCDC38Q502W7 MIR5092-201ENST00000583139 88 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 AL158827.2-201ENST00000602494 330 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 AL033523.1-201ENST00000605153 153 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 MIR6895-201ENST00000613497 78 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 AL008636.1-201ENST00000625038 1018 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 AL691447.3-201ENST00000635020 330 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CCDC38Q502W7 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
CCDC38Q502W7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCDC38Q502W7 KPNA2P1-201ENST00000458289 1591 ntBASIC2.66□□□□□ -1.98
CCDC38Q502W7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CCDC38Q502W7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.65□□□□□ -1.98
CCDC38Q502W7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CCDC38Q502W7 RNU6-595P-201ENST00000363944 107 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 SNORD115-32-201ENST00000364079 82 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 Y_RNA.263-201ENST00000364659 114 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 RNU1-91P-201ENST00000364746 163 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.65□□□□□ -1.99
CCDC38Q502W7 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.65□□□□□ -1.99
CCDC38Q502W7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.65□□□□□ -1.99
CCDC38Q502W7 SNORA4.4-201ENST00000515921 135 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 RNA5SP82-201ENST00000516707 92 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 MIR3126-201ENST00000577443 74 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 MIR4513-201ENST00000581077 86 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 AC010928.2-201ENST00000588017 287 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 AL132765.2-201ENST00000610812 351 ntBASIC2.65□□□□□ -1.99
CCDC38Q502W7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CCDC38Q502W7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CCDC38Q502W7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC38Q502W7 SNORA75.4-201ENST00000391278 119 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 RNU6-370P-201ENST00000411008 104 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 USMG5P1-201ENST00000425964 177 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 AL139109.1-201ENST00000455491 297 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 snoU13.30-201ENST00000458951 104 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 RN7SKP210-201ENST00000459176 261 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 RPL7P42-201ENST00000481005 679 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.64□□□□□ -1.99
CCDC38Q502W7 AC134698.4-201ENST00000523451 826 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 GTF3AP2-201ENST00000557014 266 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 AC090517.1-201ENST00000569307 266 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC38Q502W7 AC005899.2-201ENST00000584353 90 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.64□□□□□ -1.99
CCDC38Q502W7 SNRPGP17-201ENST00000603780 214 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 SNORD14A-201ENST00000606526 91 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 RMST_6.1-201ENST00000611980 203 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 AL359757.2-201ENST00000624309 274 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.64□□□□□ -1.99
CCDC38Q502W7 MIR1248-201ENST00000629190 106 ntBASIC2.64□□□□□ -1.99
CCDC38Q502W7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CCDC38Q502W7 Z82188.1-201ENST00000436709 154 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC38Q502W7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC38Q502W7 AC007215.1-201ENST00000464893 276 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.63□□□□□ -1.99
CCDC38Q502W7 HMGB3P3-201ENST00000510526 400 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 RPL23AP94-201ENST00000512518 302 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 RNU6-277P-201ENST00000516272 106 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 RNA5SP282-201ENST00000516355 108 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 RNU6-307P-201ENST00000516743 106 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 AL590705.4-201ENST00000532209 134 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 CBX3P8-201ENST00000532412 525 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.63□□□□□ -1.99
CCDC38Q502W7 MIR5690-201ENST00000583739 73 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 MIR1302-1-201ENST00000637932 143 ntBASIC2.63□□□□□ -1.99
CCDC38Q502W7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms