Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SNORA25.10-201ENST00000515926 124 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.16□□□□□ -1.9
LONRF3Q496Y0 AC079600.2-201ENST00000550076 130 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 MIR4319-201ENST00000577285 85 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 AC090897.2-201ENST00000581715 130 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 AC007792.1-201ENST00000623023 402 ntBASIC3.16□□□□□ -1.9
LONRF3Q496Y0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.16□□□□□ -1.9
LONRF3Q496Y0 AC009541.1-201ENST00000438279 2662 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 RNU6-595P-201ENST00000363944 107 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 U3.13-201ENST00000364804 214 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 Y_RNA.364-201ENST00000365532 101 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 RNU6-851P-201ENST00000384565 107 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 Y_RNA.577-201ENST00000384794 101 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 AL139095.1-201ENST00000404326 391 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 Z82209.1-201ENST00000422141 2135 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.15□□□□□ -1.91
LONRF3Q496Y0 AL031659.1-201ENST00000447075 539 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 AP001025.1-201ENST00000486139 332 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 RNU2-53P-201ENST00000516257 147 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.15□□□□□ -1.91
LONRF3Q496Y0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.15□□□□□ -1.91
LONRF3Q496Y0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LONRF3Q496Y0 MIR4672-201ENST00000583126 81 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.15□□□□□ -1.91
LONRF3Q496Y0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.15□□□□□ -1.91
LONRF3Q496Y0 RPL30P11-203ENST00000598995 310 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 AC092447.9-201ENST00000603395 144 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 AL138963.2-201ENST00000605137 226 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 AC090517.3-201ENST00000625170 141 ntBASIC3.15□□□□□ -1.91
LONRF3Q496Y0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LONRF3Q496Y0 MIR449A-201ENST00000362113 91 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 RNU1-115P-201ENST00000365329 160 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 AC117470.1-201ENST00000381974 330 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 RNU6-622P-201ENST00000384272 103 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 MIR544A-201ENST00000384855 91 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 MIR186-201ENST00000384988 86 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 MRPL42P3-201ENST00000401492 326 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 RNA5SP390-201ENST00000410191 113 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 RNU6-1156P-201ENST00000410365 100 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.14□□□□□ -1.91
LONRF3Q496Y0 AC087499.2-201ENST00000432861 149 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.14□□□□□ -1.91
LONRF3Q496Y0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.14□□□□□ -1.91
LONRF3Q496Y0 RNU6-1137P-201ENST00000517073 99 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LONRF3Q496Y0 MIR4446-201ENST00000578505 67 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 MIR5701-3-201ENST00000578890 82 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 MIR5701-1-201ENST00000585138 82 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 AL355297.2-201ENST00000604792 129 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 MIR5701-2-201ENST00000615634 82 ntBASIC3.14□□□□□ -1.91
LONRF3Q496Y0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LONRF3Q496Y0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.14□□□□□ -1.91
LONRF3Q496Y0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LONRF3Q496Y0 Y_RNA.145-201ENST00000363527 102 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 Y_RNA.314-201ENST00000365114 102 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 RNU2-52P-201ENST00000410680 190 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 AC113618.1-201ENST00000416747 285 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 AC003685.2-201ENST00000422795 395 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 RPL39P29-201ENST00000447779 157 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 CYP2C59P-201ENST00000457790 269 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 RN7SL297P-201ENST00000483161 293 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 AC091874.1-201ENST00000511402 339 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LONRF3Q496Y0 AC023442.1-201ENST00000531247 422 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 MIR4680-201ENST00000580906 66 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 MIR3605-201ENST00000583214 100 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 ZNF861P-201ENST00000588126 639 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 ELOCP29-201ENST00000588193 334 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.13□□□□□ -1.91
LONRF3Q496Y0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.13□□□□□ -1.91
LONRF3Q496Y0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.13□□□□□ -1.91
LONRF3Q496Y0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LONRF3Q496Y0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.13□□□□□ -1.91
LONRF3Q496Y0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 RNU6-655P-201ENST00000362858 107 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 Y_RNA.158-201ENST00000363651 101 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 SNORD32A-201ENST00000364805 84 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 RPL39P40-201ENST00000445481 146 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.12□□□□□ -1.91
LONRF3Q496Y0 SNORA9.3-201ENST00000516383 129 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AC004584.2-201ENST00000570407 410 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 MIR4513-201ENST00000581077 86 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AC060766.3-201ENST00000591442 263 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AC023043.3-201ENST00000593113 385 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AC008737.2-201ENST00000599446 118 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 AL162730.1-201ENST00000605734 292 ntBASIC3.12□□□□□ -1.91
LONRF3Q496Y0 MIR1244-1-201ENST00000612829 85 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 229 ms