Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 SNORA70.18-201ENST00000516696 98 ntBASIC4.09□□□□□ -1.75
ECM1Q16610 AP005660.1-201ENST00000522972 293 ntBASIC4.09□□□□□ -1.75
ECM1Q16610 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.09□□□□□ -1.75
ECM1Q16610 AC018692.3-201ENST00000623929 123 ntBASIC4.09□□□□□ -1.75
ECM1Q16610 MTND1P7-201ENST00000632801 297 ntBASIC4.09□□□□□ -1.75
ECM1Q16610 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.09□□□□□ -1.75
ECM1Q16610 AP000553.6-201ENST00000641242 118 ntBASIC4.09□□□□□ -1.75
ECM1Q16610 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ECM1Q16610 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
ECM1Q16610 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
ECM1Q16610 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ECM1Q16610 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ECM1Q16610 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ECM1Q16610 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.09□□□□□ -1.76
ECM1Q16610 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ECM1Q16610 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.08□□□□□ -1.76
ECM1Q16610 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ECM1Q16610 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ECM1Q16610 FAM35DP-201ENST00000323387 2712 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 Y_RNA.272-201ENST00000364696 102 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 AL359837.1-201ENST00000381357 287 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 Y_RNA.400-201ENST00000383963 111 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 DBIP2-201ENST00000419076 262 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 AL121594.1-201ENST00000475906 575 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.08□□□□□ -1.76
ECM1Q16610 AC145146.1-201ENST00000496370 254 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 RNA5SP112-201ENST00000515937 99 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 RNU1-95P-201ENST00000516357 160 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 RNU6-107P-201ENST00000516643 102 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 RNU1-128P-201ENST00000516704 160 ntBASIC4.08□□□□□ -1.76
ECM1Q16610 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.08□□□□□ -1.76
ECM1Q16610 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ECM1Q16610 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.08□□□□□ -1.76
ECM1Q16610 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ECM1Q16610 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ECM1Q16610 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ECM1Q16610 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.82-201ENST00000363000 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.92-201ENST00000363043 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.235-201ENST00000364412 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.306-201ENST00000365015 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.312-201ENST00000365089 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.322-201ENST00000365151 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 RNU6-1264P-201ENST00000383891 107 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.488-201ENST00000384403 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 MIR29B2-201ENST00000385055 81 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 RNU6-257P-201ENST00000410238 98 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.07□□□□□ -1.76
ECM1Q16610 Z75741.1-201ENST00000446793 314 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.650-201ENST00000459002 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.07□□□□□ -1.76
ECM1Q16610 RN7SKP83-201ENST00000516512 178 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 SNORA67.7-201ENST00000516664 135 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 SNORD59.2-201ENST00000516873 68 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.777-201ENST00000516982 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 RNA5SP170-201ENST00000517150 101 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.07□□□□□ -1.76
ECM1Q16610 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.07□□□□□ -1.76
ECM1Q16610 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.07□□□□□ -1.76
ECM1Q16610 MIR5006-201ENST00000583027 110 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 MIR3158-1-201ENST00000583596 81 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 MIR4765-201ENST00000585007 77 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 AC011471.1-201ENST00000585766 187 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.771-201ENST00000598668 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 AC025946.2-201ENST00000603398 234 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 AL357075.2-201ENST00000614906 189 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 Y_RNA.789-201ENST00000622480 102 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.07□□□□□ -1.76
ECM1Q16610 AC100821.1-201ENST00000523153 2479 ntBASIC4.07□□□□□ -1.76
ECM1Q16610 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ECM1Q16610 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ECM1Q16610 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ECM1Q16610 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
ECM1Q16610 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.07□□□□□ -1.76
ECM1Q16610 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
ECM1Q16610 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ECM1Q16610 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ECM1Q16610 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ECM1Q16610 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ECM1Q16610 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ECM1Q16610 RNU6-727P-201ENST00000363592 107 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 SNORD116-18-201ENST00000383961 92 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 RNU6-1083P-201ENST00000384022 107 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 Y_RNA.446-201ENST00000384178 104 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.06□□□□□ -1.76
ECM1Q16610 AC027124.2-201ENST00000428249 105 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 AC004386.2-201ENST00000441858 148 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 Y_RNA.638-201ENST00000459374 113 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 AC091959.1-201ENST00000495857 238 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.06□□□□□ -1.76
ECM1Q16610 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 RNU6-155P-201ENST00000516347 100 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 HSPE1P18-201ENST00000517602 280 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.06□□□□□ -1.76
ECM1Q16610 MIR4308-201ENST00000580634 81 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 AC006133.1-201ENST00000617106 264 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 AC073349.3-201ENST00000617616 186 ntBASIC4.06□□□□□ -1.76
ECM1Q16610 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ECM1Q16610 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ECM1Q16610 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms