Protein–RNA interactions for Protein: Q16385

SSX2, Protein SSX2, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2Q16385 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.31□□□□□ -2.2
SSX2Q16385 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 AC084364.2-201ENST00000546924 395 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.31□□□□□ -2.2
SSX2Q16385 MIR3937-201ENST00000580135 106 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 AC009994.1-201ENST00000606889 253 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 AC009161.2-201ENST00000624626 138 ntBASIC1.31□□□□□ -2.2
SSX2Q16385 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.31□□□□□ -2.2
SSX2Q16385 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.3□□□□□ -2.2
SSX2Q16385 RNU6-545P-201ENST00000362681 104 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 RNU6-1019P-201ENST00000364424 107 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 RNU6-331P-201ENST00000384724 107 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 RNU6-248P-201ENST00000410720 107 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 AL358453.1-201ENST00000422522 250 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.3□□□□□ -2.2
SSX2Q16385 FTH1P12-201ENST00000432137 551 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 USP9YP28-201ENST00000435142 589 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.3□□□□□ -2.2
SSX2Q16385 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.3□□□□□ -2.2
SSX2Q16385 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.3□□□□□ -2.2
SSX2Q16385 MTCO3P23-201ENST00000561363 289 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 SNORD53B-201ENST00000577887 78 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 MIR5583-1-201ENST00000580941 59 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 AL078604.3-201ENST00000615580 211 ntBASIC1.3□□□□□ -2.2
SSX2Q16385 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
SSX2Q16385 SNORA18.2-201ENST00000383865 132 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 RNU6-418P-201ENST00000384035 107 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 RNU6-606P-201ENST00000384721 111 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 SNORA67.5-201ENST00000391036 107 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 RNU6-1093P-201ENST00000391194 107 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 SNORA26.8-201ENST00000391306 124 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 MRPL35P1-201ENST00000404272 572 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 RNU2-29P-201ENST00000410423 189 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 PIGFP2-201ENST00000421400 651 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 AC012306.1-201ENST00000423267 114 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 AL365203.2-201ENST00000423444 196 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.29□□□□□ -2.2
SSX2Q16385 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 AC027119.1-201ENST00000440877 241 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.29□□□□□ -2.2
SSX2Q16385 OR2AQ1P-201ENST00000451972 200 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 SNRPFP3-201ENST00000457792 225 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 GMFBP1-201ENST00000467831 427 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.29□□□□□ -2.2
SSX2Q16385 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.29□□□□□ -2.2
SSX2Q16385 SUB1P2-201ENST00000556401 297 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.29□□□□□ -2.2
SSX2Q16385 AC005668.1-201ENST00000571142 476 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 AC025449.1-201ENST00000603896 529 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 CTHRC1P1-201ENST00000605383 469 ntBASIC1.29□□□□□ -2.2
SSX2Q16385 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.29□□□□□ -2.2
SSX2Q16385 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SSX2Q16385 Y_RNA.140-201ENST00000363474 103 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 RNU6-203P-201ENST00000384038 104 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 AP000275.1-201ENST00000411943 390 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.28□□□□□ -2.2
SSX2Q16385 MTCO1P21-201ENST00000416634 589 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 AL513185.2-201ENST00000425543 193 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 CETN4P-201ENST00000432407 469 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 RNU7-167P-201ENST00000459160 62 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 AC023790.1-201ENST00000482174 347 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 RPL39P5-202ENST00000512505 151 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SSX2Q16385 AC105417.1-201ENST00000514691 285 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 RNA5SP481-201ENST00000516814 122 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.28□□□□□ -2.2
SSX2Q16385 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 AC012414.6-201ENST00000568241 401 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 MIR3913-1-201ENST00000577744 102 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 BX248123.2-201ENST00000606318 124 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 AC064807.4-201ENST00000607201 407 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 AC008536.2-201ENST00000607284 349 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 AC087683.2-201ENST00000611384 326 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 AC005520.5-201ENST00000613926 164 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.28□□□□□ -2.2
SSX2Q16385 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 ZNF72P-201ENST00000425869 1908 ntBASIC1.28□□□□□ -2.2
SSX2Q16385 SNORA63D-201ENST00000364359 132 ntBASIC1.27□□□□□ -2.21
SSX2Q16385 Y_RNA.255-201ENST00000364581 97 ntBASIC1.27□□□□□ -2.21
SSX2Q16385 Y_RNA.399-201ENST00000383955 105 ntBASIC1.27□□□□□ -2.21
SSX2Q16385 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
SSX2Q16385 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.27□□□□□ -2.21
SSX2Q16385 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.27□□□□□ -2.21
SSX2Q16385 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.27□□□□□ -2.21
SSX2Q16385 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.27□□□□□ -2.21
SSX2Q16385 AC244505.5-201ENST00000443639 207 ntBASIC1.27□□□□□ -2.21
SSX2Q16385 snoU13.6-201ENST00000458785 104 ntBASIC1.27□□□□□ -2.21
SSX2Q16385 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.27□□□□□ -2.21
SSX2Q16385 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.27□□□□□ -2.21
SSX2Q16385 AP003465.2-201ENST00000602571 373 ntBASIC1.27□□□□□ -2.21
SSX2Q16385 RPL17P51-201ENST00000605218 238 ntBASIC1.27□□□□□ -2.21
SSX2Q16385 U2.17-201ENST00000611454 95 ntBASIC1.27□□□□□ -2.21
SSX2Q16385 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.27□□□□□ -2.21
SSX2Q16385 AC008147.4-201ENST00000617570 1204 ntBASIC1.27□□□□□ -2.21
SSX2Q16385 AC126177.8-201ENST00000618339 1015 ntBASIC1.27□□□□□ -2.21
SSX2Q16385 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms