Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC068790.2-201ENST00000602601 557 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AL590240.4-201ENST00000616908 390 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AL136221.1-201ENST00000621449 509 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 AC022513.1-201ENST00000624512 117 ntBASIC0.94□□□□□ -2.26
FOXF1Q12946 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
FOXF1Q12946 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.93□□□□□ -2.26
FOXF1Q12946 MIR340-201ENST00000362125 95 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 RNU1-76P-201ENST00000362903 159 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 RNU6-1120P-201ENST00000362988 108 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 RNU6-743P-201ENST00000364151 106 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 SNORD70.1-201ENST00000391007 85 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 SNORA26.8-201ENST00000391306 124 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 MTND2P18-201ENST00000419962 1030 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXF1Q12946 MRPL35P3-201ENST00000421557 364 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AL590135.1-201ENST00000422215 156 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AC019205.3-201ENST00000424573 156 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AC002486.1-201ENST00000435098 391 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AL445567.1-201ENST00000439121 144 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AC016700.2-201ENST00000446011 156 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AC132479.1-201ENST00000449160 144 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 SNRPGP9-201ENST00000456025 225 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 RPS29P15-201ENST00000458329 171 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 RNU7-167P-201ENST00000459160 62 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 HMGN1P7-201ENST00000491722 313 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AC015911.1-201ENST00000495111 156 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.93□□□□□ -2.26
FOXF1Q12946 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.93□□□□□ -2.26
FOXF1Q12946 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXF1Q12946 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.93□□□□□ -2.26
FOXF1Q12946 AL137161.1-201ENST00000532231 390 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.93□□□□□ -2.26
FOXF1Q12946 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.93□□□□□ -2.26
FOXF1Q12946 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.93□□□□□ -2.26
FOXF1Q12946 AGGF1P4-201ENST00000568249 801 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 MIR3923-201ENST00000579521 83 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 PCGEM1.1-201ENST00000613431 131 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AC072046.2-201ENST00000618366 268 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AC007494.3-201ENST00000624660 743 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 AL450472.1-202ENST00000637286 180 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 MTND4P14-201ENST00000435799 1354 ntBASIC0.93□□□□□ -2.26
FOXF1Q12946 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
FOXF1Q12946 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.92□□□□□ -2.26
FOXF1Q12946 RNU6-181P-201ENST00000363225 107 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 U3.9-201ENST00000363823 204 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 RNU6-266P-201ENST00000364225 107 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 RNU6-282P-201ENST00000365357 103 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 AP000275.1-201ENST00000411943 390 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 MTCO1P21-201ENST00000416634 589 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 MTCO2P34-201ENST00000421994 607 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 MTND2P9-201ENST00000422293 931 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.92□□□□□ -2.26
FOXF1Q12946 UBE2V1P8-201ENST00000437166 265 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 AC016925.1-201ENST00000458303 298 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 RPL31P3-201ENST00000458430 332 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 AC008628.2-201ENST00000502605 298 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 RNA5SP445-201ENST00000515889 115 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 RNU6-445P-201ENST00000516949 107 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 SNORA31.17-201ENST00000516953 127 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.92□□□□□ -2.26
FOXF1Q12946 EIF4A1P12-201ENST00000551910 141 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 AC021231.3-201ENST00000558497 370 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 CYP4A27P-201ENST00000567218 190 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 AC012414.6-201ENST00000568241 401 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 MTATP6P24-201ENST00000576835 677 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 RSL24D1P11-201ENST00000591045 491 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 AC012507.3-201ENST00000603556 477 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 AP001836.1-201ENST00000604675 523 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 AP001485.1-201ENST00000604799 199 ntBASIC0.92□□□□□ -2.26
FOXF1Q12946 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
FOXF1Q12946 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
FOXF1Q12946 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.91□□□□□ -2.26
FOXF1Q12946 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.91□□□□□ -2.26
FOXF1Q12946 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
FOXF1Q12946 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
FOXF1Q12946 RNU6-428P-201ENST00000362942 107 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 RNU6-112P-201ENST00000363599 104 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 RNU4-38P-201ENST00000364472 129 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 SNORD31B-201ENST00000364977 69 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 SNORA32.2-201ENST00000384049 122 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 RNU6-517P-201ENST00000384362 110 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 SNORA12-201ENST00000391162 147 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.91□□□□□ -2.26
FOXF1Q12946 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.91□□□□□ -2.26
FOXF1Q12946 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.91□□□□□ -2.26
FOXF1Q12946 AC005908.1-201ENST00000468701 347 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 AC010409.1-201ENST00000487382 476 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.91□□□□□ -2.26
FOXF1Q12946 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.91□□□□□ -2.26
FOXF1Q12946 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.91□□□□□ -2.26
FOXF1Q12946 SNORA31.16-201ENST00000516773 139 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 RNU6-902P-201ENST00000517212 91 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 MTCO2P4-201ENST00000517968 247 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.91□□□□□ -2.26
FOXF1Q12946 AP003034.1-201ENST00000534621 422 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 HSPE1P4-201ENST00000550617 308 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 MIR3913-1-201ENST00000577744 102 ntBASIC0.91□□□□□ -2.26
FOXF1Q12946 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.91□□□□□ -2.26
FOXF1Q12946 AC110760.3-201ENST00000598794 467 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms