Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 CBX3P1-201ENST00000325243 554 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 RNU5B-2P-201ENST00000363036 113 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 RNU4-40P-201ENST00000364351 143 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 RNU6-128P-201ENST00000383976 107 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 MIR181A1-201ENST00000385026 110 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN1BQ07699 SNRPEP10-201ENST00000420249 274 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN1BQ07699 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SCN1BQ07699 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN1BQ07699 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN1BQ07699 AC016925.1-201ENST00000458303 298 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 RNU1-131P-201ENST00000458943 161 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 RPS23P5-201ENST00000495419 428 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN1BQ07699 MTND1P35-201ENST00000526739 508 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN1BQ07699 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.92□□□□□ -2.1
SCN1BQ07699 CPDP1-201ENST00000579660 283 ntBASIC1.92□□□□□ -2.1
SCN1BQ07699 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN1BQ07699 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SCN1BQ07699 KPNA2P1-201ENST00000458289 1591 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 RNU6-332P-201ENST00000391193 108 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SCN1BQ07699 VN1R36P-201ENST00000414936 291 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 AC009963.1-201ENST00000417265 157 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 AL049873.1-201ENST00000480540 376 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 RN7SL274P-201ENST00000492268 272 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 AC096745.1-201ENST00000509945 370 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 RNA5SP281-201ENST00000516504 135 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN1BQ07699 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN1BQ07699 AC022254.1-201ENST00000567857 235 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.91□□□□□ -2.1
SCN1BQ07699 MIR4713-201ENST00000582691 75 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 MIR5002-201ENST00000584713 97 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 AC016727.2-201ENST00000603988 621 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 RPL17P51-201ENST00000605218 238 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 AC103810.6-201ENST00000606708 136 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 AC022513.1-201ENST00000624512 117 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.91□□□□□ -2.1
SCN1BQ07699 AC024614.3-201ENST00000637860 256 ntBASIC1.91□□□□□ -2.1
SCN1BQ07699 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SCN1BQ07699 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCN1BQ07699 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.9□□□□□ -2.1
SCN1BQ07699 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
SCN1BQ07699 CENPCP1-201ENST00000533085 2578 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 Y_RNA.402-201ENST00000383972 102 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 Y_RNA.530-201ENST00000384587 101 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 Y_RNA.554-201ENST00000384672 102 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 SNORA67.4-201ENST00000384688 142 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 AC009310.1-201ENST00000414414 451 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 C8orf59P1-201ENST00000429930 303 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 MTCO3P18-201ENST00000440206 761 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 AL353705.4-201ENST00000449661 238 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 RNU7-66P-201ENST00000459469 62 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 AF186996.7-201ENST00000492781 209 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN1BQ07699 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.9□□□□□ -2.11
SCN1BQ07699 RNU6-720P-201ENST00000516363 108 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.9□□□□□ -2.11
SCN1BQ07699 AP002770.2-201ENST00000543613 532 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 FGF7P1-201ENST00000582820 288 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 MIR5007-201ENST00000583098 95 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 AC005786.1-201ENST00000588553 154 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 AL133215.3-201ENST00000609801 448 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 AC005562.2-201ENST00000618264 111 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 AC009831.4-201ENST00000620744 325 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 CTSLP2-204ENST00000629029 392 ntBASIC1.9□□□□□ -2.11
SCN1BQ07699 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SCN1BQ07699 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.9□□□□□ -2.11
SCN1BQ07699 Y_RNA.3-201ENST00000362331 103 ntBASIC1.89□□□□□ -2.11
SCN1BQ07699 RNU6-545P-201ENST00000362681 104 ntBASIC1.89□□□□□ -2.11
SCN1BQ07699 RNU6-790P-201ENST00000384479 105 ntBASIC1.89□□□□□ -2.11
SCN1BQ07699 MIR549A-201ENST00000385268 96 ntBASIC1.89□□□□□ -2.11
SCN1BQ07699 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SCN1BQ07699 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
SCN1BQ07699 AL590632.1-201ENST00000424289 371 ntBASIC1.89□□□□□ -2.11
SCN1BQ07699 Z82205.1-201ENST00000428456 297 ntBASIC1.89□□□□□ -2.11
SCN1BQ07699 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN1BQ07699 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.89□□□□□ -2.11
SCN1BQ07699 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.89□□□□□ -2.11
SCN1BQ07699 AC097473.1-201ENST00000508142 408 ntBASIC1.89□□□□□ -2.11
SCN1BQ07699 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.89□□□□□ -2.11
SCN1BQ07699 EIF1P4-201ENST00000572664 335 ntBASIC1.89□□□□□ -2.11
SCN1BQ07699 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.89□□□□□ -2.11
SCN1BQ07699 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.89□□□□□ -2.11
SCN1BQ07699 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SCN1BQ07699 Y_RNA.151-201ENST00000363566 112 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.88□□□□□ -2.11
SCN1BQ07699 RNU6-784P-201ENST00000384330 106 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 RNU6-95P-201ENST00000384697 107 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 MIR221-201ENST00000385135 110 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 RPS26P42-201ENST00000413485 326 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 MTCO1P21-201ENST00000416634 589 ntBASIC1.88□□□□□ -2.11
SCN1BQ07699 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.88□□□□□ -2.11
SCN1BQ07699 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms