Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 Y_RNA.133-201ENST00000363428 110 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 Y_RNA.319-201ENST00000365138 92 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 Y_RNA.380-201ENST00000365663 111 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 RNU6-1083P-201ENST00000384022 107 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 SNORA18.3-201ENST00000384122 132 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 RPL21P75-201ENST00000396599 483 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 RPL21P28-201ENST00000401418 483 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 MIR548F4-201ENST00000408515 105 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 AL590556.1-201ENST00000423231 483 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 U8.22-201ENST00000459141 133 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 snoU13.14-201ENST00000459372 104 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 RPL21P39-201ENST00000463605 483 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 AP000870.1-201ENST00000472927 406 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 AC087190.1-201ENST00000484462 480 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 AC107032.1-201ENST00000485945 480 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 AC132942.1-201ENST00000486753 483 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 AC093591.1-201ENST00000491435 481 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 RPL21P16-201ENST00000495531 483 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 HMGB1P35-201ENST00000503360 598 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 AC079598.5-201ENST00000547460 117 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.1□□□□□ -1.91
CDC42EP1Q00587 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDC42EP1Q00587 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDC42EP1Q00587 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.09□□□□□ -1.91
CDC42EP1Q00587 Z75746.1-201ENST00000440243 2080 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 MIR26A1-201ENST00000362205 77 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 RNU6-655P-201ENST00000362858 107 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 Y_RNA.144-201ENST00000363521 113 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 RNU4-50P-201ENST00000364361 141 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 U8.10-201ENST00000384260 133 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 RPL21P3-201ENST00000395517 478 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 MIR1252-201ENST00000408861 65 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AC097463.2-201ENST00000421074 142 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.09□□□□□ -1.91
CDC42EP1Q00587 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AP000705.1-201ENST00000454567 350 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 RPS29P12-201ENST00000460178 152 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AC146507.2-201ENST00000460608 476 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 RPL31P41-201ENST00000477967 372 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.09□□□□□ -1.91
CDC42EP1Q00587 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.09□□□□□ -1.91
CDC42EP1Q00587 MIR2355-201ENST00000517199 87 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AC022868.1-201ENST00000517767 391 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AC131281.1-201ENST00000522984 164 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 CYP4A27P-201ENST00000567218 190 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AC008739.2-201ENST00000597006 317 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AL390123.1-201ENST00000603216 237 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AL355297.3-201ENST00000604082 446 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 AL138963.2-201ENST00000605137 226 ntBASIC3.09□□□□□ -1.91
CDC42EP1Q00587 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.09□□□□□ -1.92
CDC42EP1Q00587 MAPK10-362ENST00000641864 4484 ntBASIC3.09□□□□□ -1.92
CDC42EP1Q00587 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CDC42EP1Q00587 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
CDC42EP1Q00587 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 Y_RNA.152-201ENST00000363578 100 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 RNU6-708P-201ENST00000384217 107 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 MIR487A-201ENST00000385009 80 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 MIR208B-201ENST00000401172 77 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 RNA5SP21-201ENST00000410917 96 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 AIMP1P2-201ENST00000425294 312 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 UBE2DNL-203ENST00000474922 222 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 AL121594.1-201ENST00000475906 575 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 MRPS35P2-201ENST00000508242 191 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 RN7SKP132-201ENST00000516001 208 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 RNU6-635P-201ENST00000516651 102 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 AC027288.2-201ENST00000553028 243 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 AL442163.3-201ENST00000554110 156 ntBASIC3.08□□□□□ -1.92
CDC42EP1Q00587 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDC42EP1Q00587 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDC42EP1Q00587 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDC42EP1Q00587 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.07□□□□□ -1.92
CDC42EP1Q00587 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.07□□□□□ -1.92
CDC42EP1Q00587 OR56A5-201ENST00000340110 738 ntBASIC3.07□□□□□ -1.92
CDC42EP1Q00587 AC062016.1-201ENST00000355719 319 ntBASIC3.07□□□□□ -1.92
CDC42EP1Q00587 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDC42EP1Q00587 Y_RNA.27-201ENST00000362540 103 ntBASIC3.07□□□□□ -1.92
CDC42EP1Q00587 RNU6-1210P-201ENST00000363775 107 ntBASIC3.07□□□□□ -1.92
CDC42EP1Q00587 SNORA63.7-201ENST00000365579 123 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms