Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.11□□□□□ -2.43
HSPG2P98160 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.11□□□□□ -2.43
HSPG2P98160 RPL23AP50-201ENST00000434149 455 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AL031313.1-201ENST00000448435 256 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.11□□□□□ -2.43
HSPG2P98160 AC106038.2-201ENST00000520706 568 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 TPRKBP2-201ENST00000565969 475 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AC092325.1-201ENST00000566449 554 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.11□□□□□ -2.43
HSPG2P98160 AP002906.1-201ENST00000603405 233 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AC091946.2-201ENST00000606105 291 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AC084824.4-201ENST00000620106 731 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AC136475.10-201ENST00000620253 385 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 AC004009.2-201ENST00000623016 728 ntBASIC-0.11□□□□□ -2.43
HSPG2P98160 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 RN7SKP266-201ENST00000410232 287 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.12□□□□□ -2.43
HSPG2P98160 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.12□□□□□ -2.43
HSPG2P98160 AC104073.1-201ENST00000451988 151 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 SNORD126-201ENST00000459475 77 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AC008628.1-201ENST00000508663 265 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 RNU6-528P-201ENST00000516926 100 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AC022861.1-201ENST00000522981 663 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AL391001.1-201ENST00000602747 715 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.12□□□□□ -2.43
HSPG2P98160 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 RNU6-877P-201ENST00000383868 107 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MIR186-201ENST00000384988 86 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 SNORD105-201ENST00000386910 85 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 RNA5SP323-201ENST00000391094 133 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 SNORA40C-201ENST00000391285 128 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MTCO3P41-201ENST00000414801 328 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AC016831.2-201ENST00000417179 352 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MTCO3P29-201ENST00000432119 779 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.12□□□□□ -2.43
HSPG2P98160 AC013828.1-201ENST00000481845 158 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.12□□□□□ -2.43
HSPG2P98160 AC115990.1-201ENST00000526957 301 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AC093519.1-201ENST00000566109 298 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MIR4709-201ENST00000577272 72 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MIR3165-201ENST00000579874 75 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MIR4441-201ENST00000582623 100 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AC022022.2-201ENST00000602989 360 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MIR3666-201ENST00000607845 111 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MTND4P21-201ENST00000453886 1357 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 RNU6-898P-201ENST00000365627 104 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MIR301A-201ENST00000385261 86 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
HSPG2P98160 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
HSPG2P98160 MIR1285-2-201ENST00000408311 88 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 BX664727.1-201ENST00000416024 466 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AC007435.1-201ENST00000421086 415 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AC007919.1-201ENST00000429380 217 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AC005094.1-201ENST00000440420 368 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 RNFT1P2-201ENST00000443064 757 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.12□□□□□ -2.43
HSPG2P98160 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.12□□□□□ -2.43
HSPG2P98160 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.12□□□□□ -2.43
HSPG2P98160 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.12□□□□□ -2.43
HSPG2P98160 RNU6-390P-201ENST00000516259 103 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 RNU6-678P-201ENST00000516832 109 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.12□□□□□ -2.43
HSPG2P98160 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.12□□□□□ -2.43
HSPG2P98160 MTCO2P15-201ENST00000532655 656 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AL357312.1-201ENST00000603879 298 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 MIR8076-201ENST00000611401 83 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 SEPT14P17-201ENST00000617978 177 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 SNORD3E-202ENST00000627253 216 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-0.12□□□□□ -2.43
HSPG2P98160 MIR1295B-201ENST00000636144 60 ntBASIC-0.12□□□□□ -2.43
HSPG2P98160 ENSAP3-201ENST00000312710 333 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.13□□□□□ -2.43
HSPG2P98160 GTF2IP3-201ENST00000433887 494 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 MTCYBP39-201ENST00000437562 491 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 MTND5P2-201ENST00000442927 1142 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.13□□□□□ -2.43
HSPG2P98160 HMGB1P30-201ENST00000492455 606 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU1-86P-201ENST00000516108 154 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU1-107P-201ENST00000516617 154 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
HSPG2P98160 AP001328.1-201ENST00000528550 176 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 AL442163.3-201ENST00000554110 156 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 SNORD31B-201ENST00000364977 69 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-637P-201ENST00000384050 107 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 RNU6-843P-201ENST00000384454 104 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 SNORA80D-201ENST00000384488 135 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 SNORA12.1-201ENST00000390873 148 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 MTCO2P1-201ENST00000424648 477 ntBASIC-0.13□□□□□ -2.43
HSPG2P98160 VN1R10P-201ENST00000447106 875 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms