Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.45□□□□□ -2.34
H3F3AP84243 RPL23AP95-201ENST00000426806 265 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 MTND1P32-201ENST00000433043 938 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 AC073614.1-201ENST00000438690 650 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 AC245047.7-201ENST00000440265 293 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.45□□□□□ -2.34
H3F3AP84243 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.45□□□□□ -2.34
H3F3AP84243 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
H3F3AP84243 AC091435.1-201ENST00000505442 584 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.45□□□□□ -2.34
H3F3AP84243 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.45□□□□□ -2.34
H3F3AP84243 AL078603.1-201ENST00000603824 313 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.45□□□□□ -2.34
H3F3AP84243 AC022709.1-201ENST00000615967 87 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 AL157786.1-207ENST00000627771 695 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 MIR338-201ENST00000636369 67 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
H3F3AP84243 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
H3F3AP84243 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 SNORD56.2-201ENST00000363242 71 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 SNORA33-201ENST00000363664 130 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 Y_RNA.363-201ENST00000365529 113 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 RNU6-418P-201ENST00000384035 107 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 MIR518E-201ENST00000385252 88 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 RPL22P18-201ENST00000417197 377 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 C1DP4-201ENST00000455429 424 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 RPS23P5-201ENST00000495419 428 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.44□□□□□ -2.34
H3F3AP84243 MTND3P25-201ENST00000509243 135 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 RNU6-377P-201ENST00000515965 102 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 RNU6-276P-201ENST00000516114 96 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 SNORA19.3-201ENST00000516165 130 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 RNU6-201P-201ENST00000517100 61 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.44□□□□□ -2.34
H3F3AP84243 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.44□□□□□ -2.34
H3F3AP84243 AL031281.1-201ENST00000604049 488 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 RMST_2.1-201ENST00000617263 136 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.44□□□□□ -2.34
H3F3AP84243 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
H3F3AP84243 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
H3F3AP84243 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
H3F3AP84243 RNU1-76P-201ENST00000362903 159 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 RNU6-969P-201ENST00000383900 105 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 RNU6-378P-201ENST00000384324 107 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 RNU6-110P-201ENST00000384508 104 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 RNU6-1235P-201ENST00000384559 107 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 AF228730.1-201ENST00000397972 663 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.43□□□□□ -2.34
H3F3AP84243 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 MTND1P12-201ENST00000455231 147 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 RNU6-498P-201ENST00000459468 107 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 AC105758.1-201ENST00000506038 399 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 RBBP4P6-201ENST00000508098 202 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 RNA5SP255-201ENST00000516370 107 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 RNU6-1003P-201ENST00000517099 105 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 EIF4A1P12-201ENST00000551910 141 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 AC090517.1-201ENST00000569307 266 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 MIR5695-201ENST00000579717 85 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 BNIP3P16-201ENST00000589779 534 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 AC009229.3-201ENST00000608056 282 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 MIR6513-201ENST00000621188 64 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 SNORD3E-202ENST00000627253 216 ntBASIC0.43□□□□□ -2.34
H3F3AP84243 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 Y_RNA.110-201ENST00000363220 99 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 RNA5SP109-201ENST00000391010 116 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 CALM2P2-201ENST00000428512 440 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 USP9YP28-201ENST00000435142 589 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 RPL22P17-201ENST00000438729 315 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 EEF1A1P39-201ENST00000440791 250 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 AC007547.1-201ENST00000462177 490 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 RNU6-405P-201ENST00000516637 110 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 RNU6-467P-201ENST00000517027 110 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 AC022616.6-201ENST00000520479 119 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.42□□□□□ -2.34
H3F3AP84243 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.42□□□□□ -2.34
H3F3AP84243 TPRKBP2-201ENST00000565969 475 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 AC091489.2-201ENST00000566263 604 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 TMF1P1-201ENST00000576058 373 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.42□□□□□ -2.34
H3F3AP84243 MIR3118-1-201ENST00000581787 76 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 AC078795.3-201ENST00000602913 472 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 AP001596.2-201ENST00000608410 312 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.42□□□□□ -2.34
H3F3AP84243 Z69720.2-201ENST00000624755 279 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 BX322639.1-202ENST00000423987 2213 ntBASIC0.42□□□□□ -2.34
H3F3AP84243 RNU6-545P-201ENST00000362681 104 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 SNORA80D-201ENST00000384488 135 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 RNU6-950P-201ENST00000384651 107 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.41□□□□□ -2.34
H3F3AP84243 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.41□□□□□ -2.34
H3F3AP84243 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
H3F3AP84243 AC010154.1-201ENST00000425857 269 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 AC098934.3-201ENST00000430450 190 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.41□□□□□ -2.34
H3F3AP84243 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
H3F3AP84243 AC067942.3-201ENST00000512025 362 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 RNU6-947P-201ENST00000516264 106 ntBASIC0.41□□□□□ -2.34
H3F3AP84243 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms