Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HIST1H3AP68431 RNU1-76P-201ENST00000362903 159 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 Y_RNA.164-201ENST00000363709 102 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 RNU6-378P-201ENST00000384324 107 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 RNU6-110P-201ENST00000384508 104 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 AF228730.1-201ENST00000397972 663 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 RPL21P1-201ENST00000399532 476 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.43□□□□□ -2.34
HIST1H3AP68431 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.43□□□□□ -2.34
HIST1H3AP68431 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 MTND1P12-201ENST00000455231 147 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 AC105758.1-201ENST00000506038 399 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 RBBP4P6-201ENST00000508098 202 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 RNA5SP255-201ENST00000516370 107 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 RNU6-1003P-201ENST00000517099 105 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 EIF4A1P12-201ENST00000551910 141 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 AC090517.1-201ENST00000569307 266 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 MIR5695-201ENST00000579717 85 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 BNIP3P16-201ENST00000589779 534 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.43□□□□□ -2.34
HIST1H3AP68431 SNORD3E-202ENST00000627253 216 ntBASIC0.43□□□□□ -2.34
HIST1H3AP68431 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 Y_RNA.110-201ENST00000363220 99 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 Y_RNA.363-201ENST00000365529 113 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 RNU6-969P-201ENST00000383900 105 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 RNA5SP109-201ENST00000391010 116 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H3AP68431 CALM2P2-201ENST00000428512 440 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 USP9YP28-201ENST00000435142 589 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 RPL22P17-201ENST00000438729 315 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 EEF1A1P39-201ENST00000440791 250 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 AC022616.6-201ENST00000520479 119 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H3AP68431 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.42□□□□□ -2.34
HIST1H3AP68431 TPRKBP2-201ENST00000565969 475 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 AC091489.2-201ENST00000566263 604 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 TMF1P1-201ENST00000576058 373 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.42□□□□□ -2.34
HIST1H3AP68431 MIR3118-1-201ENST00000581787 76 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 AC078795.3-201ENST00000602913 472 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 AL353765.1-201ENST00000605514 183 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 AC009229.3-201ENST00000608056 282 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.42□□□□□ -2.34
HIST1H3AP68431 Z69720.2-201ENST00000624755 279 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 BX322639.1-202ENST00000423987 2213 ntBASIC0.42□□□□□ -2.34
HIST1H3AP68431 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
HIST1H3AP68431 RNU6-545P-201ENST00000362681 104 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 SNORA80D-201ENST00000384488 135 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 RNU6-950P-201ENST00000384651 107 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 MIR499A-201ENST00000384903 122 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.41□□□□□ -2.34
HIST1H3AP68431 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST1H3AP68431 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
HIST1H3AP68431 AC010154.1-201ENST00000425857 269 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.41□□□□□ -2.34
HIST1H3AP68431 AC067942.3-201ENST00000512025 362 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 RNU6-947P-201ENST00000516264 106 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.41□□□□□ -2.34
HIST1H3AP68431 MIR5000-201ENST00000577717 103 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 MIR151B-201ENST00000584249 96 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 AC073539.2-201ENST00000597113 165 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 AL513534.2-201ENST00000603836 250 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 RPL17P51-201ENST00000605218 238 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 AC106754.2-201ENST00000623006 233 ntBASIC0.41□□□□□ -2.34
HIST1H3AP68431 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.4□□□□□ -2.34
HIST1H3AP68431 SNORA24.1-201ENST00000384401 135 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 AC078809.1-201ENST00000427601 140 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 AC000111.3-201ENST00000433478 193 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 MTCO3P18-201ENST00000440206 761 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.4□□□□□ -2.35
HIST1H3AP68431 AC007547.1-201ENST00000462177 490 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 MTCO3P7-201ENST00000510008 774 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 RNA5SP337-201ENST00000517007 109 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 AL137100.2-201ENST00000555786 315 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.4□□□□□ -2.35
HIST1H3AP68431 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H3AP68431 MTND3P19-201ENST00000603825 345 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 AL139022.2-201ENST00000606934 443 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
HIST1H3AP68431 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.4□□□□□ -2.35
HIST1H3AP68431 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNA5SP347-201ENST00000362445 119 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-37P-201ENST00000362692 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 snoU2-30.2-201ENST00000362805 70 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-11P-201ENST00000364234 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-25P-201ENST00000383873 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-1-201ENST00000383898 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-48P-201ENST00000384161 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-36P-201ENST00000384172 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-4P-201ENST00000384205 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-5P-201ENST00000384238 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-3P-201ENST00000384314 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-16P-201ENST00000384385 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-505P-201ENST00000384427 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-15P-201ENST00000384534 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-2-201ENST00000384627 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-29P-201ENST00000384637 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-1031P-201ENST00000384773 107 ntBASIC0.39□□□□□ -2.35
HIST1H3AP68431 RNU6-9-201ENST00000384776 107 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms