Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.47□□□□□ -1.85
HERVK_113P62684 MIR4319-201ENST00000577285 85 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 MIR4659A-201ENST00000580269 81 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 AL359198.2-201ENST00000611836 194 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 AL442067.1-201ENST00000613261 223 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 AC240442.1-201ENST00000616055 283 ntBASIC3.47□□□□□ -1.85
HERVK_113P62684 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.47□□□□□ -1.85
HERVK_113P62684 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HERVK_113P62684 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HERVK_113P62684 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.46□□□□□ -1.85
HERVK_113P62684 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HERVK_113P62684 Y_RNA.60-201ENST00000362831 98 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 SNORA20.1-201ENST00000364790 130 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 RNU6-198P-201ENST00000384258 104 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 Y_RNA.552-201ENST00000384665 112 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 MIR215-201ENST00000384858 110 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 MIR487A-201ENST00000385009 80 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 RNA5SP38-201ENST00000410750 119 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 RNU2-25P-201ENST00000411041 191 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 RPL32P35-201ENST00000415214 394 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 AC244670.1-201ENST00000436879 112 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 AC016700.2-201ENST00000446011 156 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.46□□□□□ -1.86
HERVK_113P62684 snoU13.6-201ENST00000458785 104 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.46□□□□□ -1.86
HERVK_113P62684 AC107626.1-201ENST00000471084 183 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 AC025465.3-201ENST00000510570 311 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.46□□□□□ -1.86
HERVK_113P62684 SDR42E1P4-201ENST00000620894 481 ntBASIC3.46□□□□□ -1.86
HERVK_113P62684 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.46□□□□□ -1.86
HERVK_113P62684 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HERVK_113P62684 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HERVK_113P62684 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HERVK_113P62684 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HERVK_113P62684 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HERVK_113P62684 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.45□□□□□ -1.86
HERVK_113P62684 Y_RNA.84-201ENST00000363011 104 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 RNU5B-2P-201ENST00000363036 113 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 Y_RNA.319-201ENST00000365138 92 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 AL079342.1-201ENST00000401460 267 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 AL133475.1-201ENST00000404414 305 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 RNU2-49P-201ENST00000410666 184 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 AC023141.4-201ENST00000412031 328 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 RPS15AP7-201ENST00000439294 405 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 RPS12P18-201ENST00000442381 270 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.45□□□□□ -1.86
HERVK_113P62684 SCGB1D5P-201ENST00000515134 247 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 Y_RNA.673-201ENST00000516306 88 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 RNA5SP380-201ENST00000517190 98 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 RNU6-711P-201ENST00000517255 106 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 CKS1BP7-201ENST00000522230 235 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 AC136932.1-201ENST00000574771 208 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 MIR5695-201ENST00000579717 85 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 MIR4300-201ENST00000581016 96 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 MIR3124-201ENST00000582636 67 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 AC005296.1-201ENST00000616145 209 ntBASIC3.45□□□□□ -1.86
HERVK_113P62684 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HERVK_113P62684 AL136360.1-201ENST00000503377 1900 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HERVK_113P62684 AC062016.1-201ENST00000355719 319 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 SNORA18.3-201ENST00000384122 132 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 RNU6-851P-201ENST00000384565 107 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 RNU6-19P-201ENST00000384718 107 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 RNU6-1093P-201ENST00000391194 107 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 RNU6-1140P-201ENST00000410517 106 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 EIF1P2-201ENST00000428233 350 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 WARS2P1-201ENST00000429678 537 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.44□□□□□ -1.86
HERVK_113P62684 AC108938.1-201ENST00000451204 136 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 SNORA31.1-201ENST00000515993 133 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 RNU6-1114P-201ENST00000516022 107 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 SNORA31.5-201ENST00000516190 133 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 RNU6-1012P-201ENST00000516606 109 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 AC016256.1-201ENST00000547971 354 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 AC090897.2-201ENST00000581715 130 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 AC012433.1-201ENST00000588916 398 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.44□□□□□ -1.86
HERVK_113P62684 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 AC137590.2-201ENST00000619709 240 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 HAUS6P2-201ENST00000433254 2404 ntBASIC3.44□□□□□ -1.86
HERVK_113P62684 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
HERVK_113P62684 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HERVK_113P62684 RNU6-1159P-201ENST00000362933 107 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 SNORD115-46-201ENST00000390982 71 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 RNA5SP390-201ENST00000410191 113 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 Y_RNA.602-201ENST00000410535 92 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 RN7SKP61-201ENST00000410642 295 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 RNU6-1203P-201ENST00000410703 110 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 RNA5SP184-201ENST00000411071 108 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.43□□□□□ -1.86
HERVK_113P62684 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.43□□□□□ -1.86
HERVK_113P62684 PTGES3P4-201ENST00000426243 356 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 AC078809.1-201ENST00000427601 140 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 AL714022.1-201ENST00000439897 151 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 MTND4LP30-201ENST00000454092 297 ntBASIC3.43□□□□□ -1.86
HERVK_113P62684 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.43□□□□□ -1.86
HERVK_113P62684 MTND1P19-201ENST00000511780 315 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms