Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 MIR548J-201ENST00000408833 112 ntBASIC0.44□□□□□ -2.34
LSM6P62312 MTCO3P18-201ENST00000440206 761 ntBASIC0.44□□□□□ -2.34
LSM6P62312 AL162395.1-201ENST00000457882 422 ntBASIC0.44□□□□□ -2.34
LSM6P62312 SRRM1P2-201ENST00000464531 1192 ntBASIC0.44□□□□□ -2.34
LSM6P62312 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.44□□□□□ -2.34
LSM6P62312 AL163973.1-201ENST00000484753 577 ntBASIC0.44□□□□□ -2.34
LSM6P62312 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.44□□□□□ -2.34
LSM6P62312 AC105758.1-201ENST00000506038 399 ntBASIC0.44□□□□□ -2.34
LSM6P62312 MTCO3P7-201ENST00000510008 774 ntBASIC0.44□□□□□ -2.34
LSM6P62312 AC109479.2-201ENST00000517842 174 ntBASIC0.44□□□□□ -2.34
LSM6P62312 AC010376.1-201ENST00000522101 334 ntBASIC0.44□□□□□ -2.34
LSM6P62312 AC107934.1-201ENST00000522215 217 ntBASIC0.44□□□□□ -2.34
LSM6P62312 AC092451.2-201ENST00000538746 658 ntBASIC0.44□□□□□ -2.34
LSM6P62312 AC018659.1-201ENST00000551083 169 ntBASIC0.44□□□□□ -2.34
LSM6P62312 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.44□□□□□ -2.34
LSM6P62312 AL031281.1-201ENST00000604049 488 ntBASIC0.44□□□□□ -2.34
LSM6P62312 AL353765.1-201ENST00000605514 183 ntBASIC0.44□□□□□ -2.34
LSM6P62312 AC021506.2-201ENST00000612354 169 ntBASIC0.44□□□□□ -2.34
LSM6P62312 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
LSM6P62312 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.44□□□□□ -2.34
LSM6P62312 RNU6-433P-201ENST00000363216 104 ntBASIC0.43□□□□□ -2.34
LSM6P62312 SNORD56.2-201ENST00000363242 71 ntBASIC0.43□□□□□ -2.34
LSM6P62312 U3.4-201ENST00000363352 213 ntBASIC0.43□□□□□ -2.34
LSM6P62312 MIR605-201ENST00000385078 83 ntBASIC0.43□□□□□ -2.34
LSM6P62312 RNU6-293P-201ENST00000411259 106 ntBASIC0.43□□□□□ -2.34
LSM6P62312 RPL23AP95-201ENST00000426806 265 ntBASIC0.43□□□□□ -2.34
LSM6P62312 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.43□□□□□ -2.34
LSM6P62312 AC092628.1-201ENST00000436250 252 ntBASIC0.43□□□□□ -2.34
LSM6P62312 FABP5P4-201ENST00000437203 171 ntBASIC0.43□□□□□ -2.34
LSM6P62312 AC073614.1-201ENST00000438690 650 ntBASIC0.43□□□□□ -2.34
LSM6P62312 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.43□□□□□ -2.34
LSM6P62312 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.43□□□□□ -2.34
LSM6P62312 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
LSM6P62312 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
LSM6P62312 Y_RNA.164-201ENST00000363709 102 ntBASIC0.42□□□□□ -2.34
LSM6P62312 RNU4-12P-201ENST00000365233 139 ntBASIC0.42□□□□□ -2.34
LSM6P62312 AF228730.1-201ENST00000397972 663 ntBASIC0.42□□□□□ -2.34
LSM6P62312 EEF1A1P40-201ENST00000412883 573 ntBASIC0.42□□□□□ -2.34
LSM6P62312 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.42□□□□□ -2.34
LSM6P62312 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.42□□□□□ -2.34
LSM6P62312 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.42□□□□□ -2.34
LSM6P62312 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.42□□□□□ -2.34
LSM6P62312 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.42□□□□□ -2.34
LSM6P62312 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.42□□□□□ -2.34
LSM6P62312 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.42□□□□□ -2.34
LSM6P62312 MIR4742-201ENST00000581069 85 ntBASIC0.42□□□□□ -2.34
LSM6P62312 MIR151B-201ENST00000584249 96 ntBASIC0.42□□□□□ -2.34
LSM6P62312 AL512605.2-201ENST00000592972 256 ntBASIC0.42□□□□□ -2.34
LSM6P62312 AC012557.2-201ENST00000605919 418 ntBASIC0.42□□□□□ -2.34
LSM6P62312 AL157786.1-207ENST00000627771 695 ntBASIC0.42□□□□□ -2.34
LSM6P62312 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
LSM6P62312 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
LSM6P62312 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.41□□□□□ -2.34
LSM6P62312 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
LSM6P62312 snoU2-30.2-201ENST00000362805 70 ntBASIC0.41□□□□□ -2.34
LSM6P62312 U3.8-201ENST00000363675 217 ntBASIC0.41□□□□□ -2.34
LSM6P62312 RNU6-1031P-201ENST00000384773 107 ntBASIC0.41□□□□□ -2.34
LSM6P62312 RNU6-607P-201ENST00000411283 108 ntBASIC0.41□□□□□ -2.34
LSM6P62312 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.41□□□□□ -2.34
LSM6P62312 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.41□□□□□ -2.34
LSM6P62312 USP9YP28-201ENST00000435142 589 ntBASIC0.41□□□□□ -2.34
LSM6P62312 GAPDHP17-201ENST00000449858 1001 ntBASIC0.41□□□□□ -2.34
LSM6P62312 AC016632.1-201ENST00000503994 196 ntBASIC0.41□□□□□ -2.34
LSM6P62312 AC091435.1-201ENST00000505442 584 ntBASIC0.41□□□□□ -2.34
LSM6P62312 AC117522.1-201ENST00000509821 380 ntBASIC0.41□□□□□ -2.34
LSM6P62312 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.41□□□□□ -2.34
LSM6P62312 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.41□□□□□ -2.34
LSM6P62312 AC090517.1-201ENST00000569307 266 ntBASIC0.41□□□□□ -2.34
LSM6P62312 MIR5000-201ENST00000577717 103 ntBASIC0.41□□□□□ -2.34
LSM6P62312 AL929325.1-201ENST00000603096 117 ntBASIC0.41□□□□□ -2.34
LSM6P62312 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
LSM6P62312 AL139022.2-201ENST00000606934 443 ntBASIC0.41□□□□□ -2.34
LSM6P62312 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
LSM6P62312 AL136221.1-201ENST00000621449 509 ntBASIC0.41□□□□□ -2.34
LSM6P62312 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.41□□□□□ -2.34
LSM6P62312 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
LSM6P62312 RNA5SP499-201ENST00000363982 119 ntBASIC0.4□□□□□ -2.35
LSM6P62312 MIR499A-201ENST00000384903 122 ntBASIC0.4□□□□□ -2.35
LSM6P62312 RPL21P1-201ENST00000399532 476 ntBASIC0.4□□□□□ -2.35
LSM6P62312 RN7SKP200-201ENST00000410564 320 ntBASIC0.4□□□□□ -2.35
LSM6P62312 RNU6-387P-201ENST00000411331 105 ntBASIC0.4□□□□□ -2.35
LSM6P62312 MTATP6P20-201ENST00000414147 562 ntBASIC0.4□□□□□ -2.35
LSM6P62312 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
LSM6P62312 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
LSM6P62312 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.4□□□□□ -2.35
LSM6P62312 EEF1A1P39-201ENST00000440791 250 ntBASIC0.4□□□□□ -2.35
LSM6P62312 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.4□□□□□ -2.35
LSM6P62312 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.4□□□□□ -2.35
LSM6P62312 AC092991.1-201ENST00000477176 376 ntBASIC0.4□□□□□ -2.35
LSM6P62312 AC098869.1-201ENST00000481627 292 ntBASIC0.4□□□□□ -2.35
LSM6P62312 AC022616.6-201ENST00000520479 119 ntBASIC0.4□□□□□ -2.35
LSM6P62312 AC064807.4-201ENST00000607201 407 ntBASIC0.4□□□□□ -2.35
LSM6P62312 AC136475.10-201ENST00000620253 385 ntBASIC0.4□□□□□ -2.35
LSM6P62312 ELL2P3-201ENST00000457883 1602 ntBASIC0.39□□□□□ -2.35
LSM6P62312 RNU6-969P-201ENST00000383900 105 ntBASIC0.39□□□□□ -2.35
LSM6P62312 RNU6-418P-201ENST00000384035 107 ntBASIC0.39□□□□□ -2.35
LSM6P62312 MIR10B-201ENST00000385011 110 ntBASIC0.39□□□□□ -2.35
LSM6P62312 AL133396.1-201ENST00000432048 687 ntBASIC0.39□□□□□ -2.35
LSM6P62312 RPL22P17-201ENST00000438729 315 ntBASIC0.39□□□□□ -2.35
LSM6P62312 C1DP4-201ENST00000455429 424 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms