Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.07□□□□□ -2.42
CKS1BP61024 AL354696.1-201ENST00000614652 497 ntBASIC-0.07□□□□□ -2.42
CKS1BP61024 AC131159.1-201ENST00000621854 213 ntBASIC-0.07□□□□□ -2.42
CKS1BP61024 AC100810.6-201ENST00000638068 285 ntBASIC-0.07□□□□□ -2.42
CKS1BP61024 AC092104.1-201ENST00000497346 1441 ntBASIC-0.07□□□□□ -2.42
CKS1BP61024 RNU1-76P-201ENST00000362903 159 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 SNORD44.1-201ENST00000363202 61 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 RNU4-67P-201ENST00000364569 141 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 RNU4-56P-201ENST00000364700 142 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 RNU6-207P-201ENST00000384137 107 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 CALM2P3-201ENST00000400429 449 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 AL451046.2-201ENST00000403074 277 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 RN7SKP200-201ENST00000410564 320 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.08□□□□□ -2.42
CKS1BP61024 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 AC245047.8-201ENST00000456455 284 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.08□□□□□ -2.42
CKS1BP61024 AC109445.1-201ENST00000512356 383 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 AP003327.1-201ENST00000529684 127 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 AC016957.1-201ENST00000534895 309 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 SUB1P2-201ENST00000556401 297 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 VN1R87P-201ENST00000596706 487 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 Z98751.3-201ENST00000604447 521 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 AC103706.2-201ENST00000638080 240 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 BX322639.1-202ENST00000423987 2213 ntBASIC-0.08□□□□□ -2.42
CKS1BP61024 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.08□□□□□ -2.42
CKS1BP61024 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 RNU6-236P-201ENST00000363886 106 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 RNU6-354P-201ENST00000383862 107 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 RNU6-610P-201ENST00000384264 107 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 RNA5SP109-201ENST00000391010 116 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 RNU1-139P-201ENST00000391307 165 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 RNA5SP504-201ENST00000410676 117 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 SNRPGP9-201ENST00000456025 225 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 AK3P2-201ENST00000507976 429 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.09□□□□□ -2.42
CKS1BP61024 RNU1-86P-201ENST00000516108 154 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 RNU1-107P-201ENST00000516617 154 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.09□□□□□ -2.42
CKS1BP61024 MIR4667-201ENST00000578933 66 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 MIR4768-201ENST00000585270 74 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 AL136317.1-201ENST00000612653 226 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 AC026585.1-201ENST00000619582 524 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 AC097460.3-201ENST00000623099 442 ntBASIC-0.09□□□□□ -2.42
CKS1BP61024 SNORA33-201ENST00000363664 130 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 RNU6-384P-201ENST00000364900 104 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 RNU4-48P-201ENST00000365559 182 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 RNA5SP219-201ENST00000390940 113 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.1□□□□□ -2.43
CKS1BP61024 AC010154.1-201ENST00000425857 269 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 RPL23AP50-201ENST00000434149 455 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.1□□□□□ -2.43
CKS1BP61024 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.1□□□□□ -2.43
CKS1BP61024 AL133217.1-201ENST00000450980 425 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.1□□□□□ -2.43
CKS1BP61024 SNORA31.10-201ENST00000516482 106 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.1□□□□□ -2.43
CKS1BP61024 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.1□□□□□ -2.43
CKS1BP61024 AC064872.1-201ENST00000604823 1072 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 AC007742.2-201ENST00000618226 398 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 AL603839.4-201ENST00000624658 1005 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 AC006927.4-201ENST00000639187 543 ntBASIC-0.1□□□□□ -2.43
CKS1BP61024 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
CKS1BP61024 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
CKS1BP61024 RNU6-468P-201ENST00000384003 109 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 MIR660-201ENST00000385235 97 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 RNU6-177P-201ENST00000411257 104 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.11□□□□□ -2.43
CKS1BP61024 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 MTCO1P27-201ENST00000448269 226 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 AC007547.1-201ENST00000462177 490 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 AL163973.1-201ENST00000484753 577 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 HMGB1P29-201ENST00000505659 499 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
CKS1BP61024 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 ZNF321P-202ENST00000550843 495 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.11□□□□□ -2.43
CKS1BP61024 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC-0.11□□□□□ -2.43
CKS1BP61024 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.11□□□□□ -2.43
CKS1BP61024 MIR548AC-201ENST00000585049 88 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 AC008752.3-201ENST00000588113 712 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 AC112191.3-201ENST00000604371 277 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 AC099785.1-201ENST00000605697 437 ntBASIC-0.11□□□□□ -2.43
CKS1BP61024 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
CKS1BP61024 MIR411-201ENST00000362239 96 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 SNORA63.3-201ENST00000362682 132 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 RNU6-199P-201ENST00000362954 107 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 RNU6-946P-201ENST00000383878 107 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 RNY1P8-201ENST00000383970 114 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 AL355796.1-201ENST00000406706 323 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 MIR320C1-201ENST00000408566 88 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 RN7SKP266-201ENST00000410232 287 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.12□□□□□ -2.43
CKS1BP61024 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.12□□□□□ -2.43
CKS1BP61024 MTND2P30-201ENST00000456663 382 ntBASIC-0.12□□□□□ -2.43
CKS1BP61024 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms