Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SNORA48.1-201ENST00000390879 135 ntBASIC1.81□□□□□ -2.12
SRP54P61011 AC009310.1-201ENST00000414414 451 ntBASIC1.81□□□□□ -2.12
SRP54P61011 AC123900.1-201ENST00000420390 96 ntBASIC1.81□□□□□ -2.12
SRP54P61011 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.81□□□□□ -2.12
SRP54P61011 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.81□□□□□ -2.12
SRP54P61011 RNU1-131P-201ENST00000458943 161 ntBASIC1.81□□□□□ -2.12
SRP54P61011 AC007547.1-201ENST00000462177 490 ntBASIC1.81□□□□□ -2.12
SRP54P61011 SRRM1P2-201ENST00000464531 1192 ntBASIC1.81□□□□□ -2.12
SRP54P61011 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.81□□□□□ -2.12
SRP54P61011 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.81□□□□□ -2.12
SRP54P61011 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.81□□□□□ -2.12
SRP54P61011 RNU6-612P-201ENST00000516909 102 ntBASIC1.81□□□□□ -2.12
SRP54P61011 AP005597.4-201ENST00000526762 229 ntBASIC1.81□□□□□ -2.12
SRP54P61011 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.81□□□□□ -2.12
SRP54P61011 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.81□□□□□ -2.12
SRP54P61011 AL118558.2-201ENST00000556294 238 ntBASIC1.81□□□□□ -2.12
SRP54P61011 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.81□□□□□ -2.12
SRP54P61011 MIR3169-201ENST00000578032 83 ntBASIC1.81□□□□□ -2.12
SRP54P61011 BNIP3P10-201ENST00000605360 577 ntBASIC1.81□□□□□ -2.12
SRP54P61011 AC064807.4-201ENST00000607201 407 ntBASIC1.81□□□□□ -2.12
SRP54P61011 Z99129.1-201ENST00000612510 255 ntBASIC1.81□□□□□ -2.12
SRP54P61011 AL158209.2-201ENST00000619266 216 ntBASIC1.81□□□□□ -2.12
SRP54P61011 AC068792.1-201ENST00000621354 417 ntBASIC1.81□□□□□ -2.12
SRP54P61011 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.81□□□□□ -2.12
SRP54P61011 AL359880.1-201ENST00000621879 266 ntBASIC1.81□□□□□ -2.12
SRP54P61011 MTND4P23-201ENST00000447723 1363 ntBASIC1.81□□□□□ -2.12
SRP54P61011 LINC02555-201ENST00000563933 1951 ntBASIC1.8□□□□□ -2.12
SRP54P61011 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
SRP54P61011 RNU6-227P-201ENST00000362865 103 ntBASIC1.8□□□□□ -2.12
SRP54P61011 Y_RNA.409-201ENST00000383990 98 ntBASIC1.8□□□□□ -2.12
SRP54P61011 MTCO3P40-201ENST00000392516 676 ntBASIC1.8□□□□□ -2.12
SRP54P61011 TIMM9P3-201ENST00000428659 274 ntBASIC1.8□□□□□ -2.12
SRP54P61011 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.8□□□□□ -2.12
SRP54P61011 Y_RNA.638-201ENST00000459374 113 ntBASIC1.8□□□□□ -2.12
SRP54P61011 RNU6-1208P-201ENST00000459588 107 ntBASIC1.8□□□□□ -2.12
SRP54P61011 RNU6-835P-201ENST00000516974 104 ntBASIC1.8□□□□□ -2.12
SRP54P61011 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.8□□□□□ -2.12
SRP54P61011 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.8□□□□□ -2.12
SRP54P61011 AC084768.2-201ENST00000622736 221 ntBASIC1.8□□□□□ -2.12
SRP54P61011 AC009541.1-201ENST00000438279 2662 ntBASIC1.8□□□□□ -2.12
SRP54P61011 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SRP54P61011 RNU1-17P-201ENST00000363022 152 ntBASIC1.79□□□□□ -2.12
SRP54P61011 RNU4-20P-201ENST00000365601 151 ntBASIC1.79□□□□□ -2.12
SRP54P61011 Y_RNA.378-201ENST00000365652 113 ntBASIC1.79□□□□□ -2.12
SRP54P61011 RNU6-1329P-201ENST00000365664 107 ntBASIC1.79□□□□□ -2.12
SRP54P61011 MIR514A2-201ENST00000385131 88 ntBASIC1.79□□□□□ -2.12
SRP54P61011 MIR514A3-201ENST00000385132 88 ntBASIC1.79□□□□□ -2.12
SRP54P61011 RNU6-648P-201ENST00000410190 107 ntBASIC1.79□□□□□ -2.12
SRP54P61011 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.79□□□□□ -2.12
SRP54P61011 MTCO3P41-201ENST00000414801 328 ntBASIC1.79□□□□□ -2.12
SRP54P61011 AC012306.1-201ENST00000423267 114 ntBASIC1.79□□□□□ -2.12
SRP54P61011 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.79□□□□□ -2.12
SRP54P61011 Z83846.1-201ENST00000446798 265 ntBASIC1.79□□□□□ -2.12
SRP54P61011 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.79□□□□□ -2.12
SRP54P61011 RNA5SP57-201ENST00000459463 123 ntBASIC1.79□□□□□ -2.12
SRP54P61011 U8.21-201ENST00000459536 136 ntBASIC1.79□□□□□ -2.12
SRP54P61011 SNORA19.2-201ENST00000516013 114 ntBASIC1.79□□□□□ -2.12
SRP54P61011 RNU6-1038P-201ENST00000516516 104 ntBASIC1.79□□□□□ -2.12
SRP54P61011 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.79□□□□□ -2.12
SRP54P61011 RNU6-323P-201ENST00000521915 107 ntBASIC1.79□□□□□ -2.12
SRP54P61011 AC005786.1-201ENST00000588553 154 ntBASIC1.79□□□□□ -2.12
SRP54P61011 AC009994.1-201ENST00000606889 253 ntBASIC1.79□□□□□ -2.12
SRP54P61011 AL357078.3-201ENST00000607528 618 ntBASIC1.79□□□□□ -2.12
SRP54P61011 AL590240.4-201ENST00000616908 390 ntBASIC1.79□□□□□ -2.12
SRP54P61011 AC124864.2-201ENST00000624736 186 ntBASIC1.79□□□□□ -2.12
SRP54P61011 OR5AK4P-201ENST00000635912 903 ntBASIC1.79□□□□□ -2.12
SRP54P61011 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
SRP54P61011 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.78□□□□□ -2.12
SRP54P61011 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SRP54P61011 SNORA32.2-201ENST00000384049 122 ntBASIC1.78□□□□□ -2.12
SRP54P61011 SNORA36A-201ENST00000384221 132 ntBASIC1.78□□□□□ -2.12
SRP54P61011 RNU6-378P-201ENST00000384324 107 ntBASIC1.78□□□□□ -2.12
SRP54P61011 RNA5SP213-201ENST00000391031 106 ntBASIC1.78□□□□□ -2.12
SRP54P61011 MIR208B-201ENST00000401172 77 ntBASIC1.78□□□□□ -2.12
SRP54P61011 RNU2-16P-201ENST00000410712 136 ntBASIC1.78□□□□□ -2.12
SRP54P61011 RNU2-41P-201ENST00000410991 178 ntBASIC1.78□□□□□ -2.12
SRP54P61011 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP54P61011 USP9YP14-201ENST00000430663 563 ntBASIC1.78□□□□□ -2.12
SRP54P61011 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP54P61011 AL359672.1-201ENST00000442302 409 ntBASIC1.78□□□□□ -2.12
SRP54P61011 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP54P61011 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP54P61011 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
SRP54P61011 AC107401.1-201ENST00000503426 685 ntBASIC1.78□□□□□ -2.12
SRP54P61011 AC114801.2-201ENST00000503825 781 ntBASIC1.78□□□□□ -2.12
SRP54P61011 AC021146.2-201ENST00000504736 556 ntBASIC1.78□□□□□ -2.12
SRP54P61011 SNORA25.15-201ENST00000516487 89 ntBASIC1.78□□□□□ -2.12
SRP54P61011 Y_RNA.693-201ENST00000516641 110 ntBASIC1.78□□□□□ -2.12
SRP54P61011 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SRP54P61011 AC025423.5-201ENST00000550230 219 ntBASIC1.78□□□□□ -2.12
SRP54P61011 MIR5692C1-201ENST00000585309 91 ntBASIC1.78□□□□□ -2.12
SRP54P61011 AC092807.2-201ENST00000609367 243 ntBASIC1.78□□□□□ -2.12
SRP54P61011 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.78□□□□□ -2.12
SRP54P61011 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SRP54P61011 RNU1-76P-201ENST00000362903 159 ntBASIC1.77□□□□□ -2.13
SRP54P61011 SNORD114-6-201ENST00000364393 72 ntBASIC1.77□□□□□ -2.13
SRP54P61011 SNORA16.1-201ENST00000364597 132 ntBASIC1.77□□□□□ -2.13
SRP54P61011 EIF4E2P1-201ENST00000393781 255 ntBASIC1.77□□□□□ -2.13
SRP54P61011 RPS20P15-201ENST00000412792 311 ntBASIC1.77□□□□□ -2.13
SRP54P61011 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms