Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS2P54868 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS2P54868 AK3P2-201ENST00000507976 429 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS2P54868 AC008526.1-201ENST00000509149 338 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 RNU6-864P-201ENST00000516256 108 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 RNU6-256P-201ENST00000516747 97 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS2P54868 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS2P54868 AC104576.1-201ENST00000524225 88 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 CYCSP26-201ENST00000534107 320 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.99□□□□□ -2.09
HMGCS2P54868 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGCS2P54868 MIR4419B-201ENST00000577260 68 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 BNIP3P16-201ENST00000589779 534 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 VN1R107P-201ENST00000601784 209 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 DUXAP9-208ENST00000622815 614 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGCS2P54868 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.99□□□□□ -2.09
HMGCS2P54868 MTND4P23-201ENST00000447723 1363 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.98□□□□□ -2.09
HMGCS2P54868 SNORD114-19-201ENST00000363072 75 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 SNORD32A-201ENST00000364805 84 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 Y_RNA.301-201ENST00000364990 103 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 MIR544A-201ENST00000384855 91 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 MT-TL1-201ENST00000386347 75 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 RNU2-23P-201ENST00000410545 195 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 AIMP1P2-201ENST00000425294 312 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGCS2P54868 AMD1P1-201ENST00000457220 922 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 RPL30P12-201ENST00000474666 353 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 AL163540.1-201ENST00000485382 386 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 AC005840.1-201ENST00000498412 377 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 RNU4-49P-201ENST00000516080 140 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 RNU7-193P-201ENST00000516723 65 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 RNU6-1088P-201ENST00000516850 104 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 AC109329.1-201ENST00000518744 317 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGCS2P54868 AC118273.2-201ENST00000532092 465 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 TRAV32-201ENST00000553993 340 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGCS2P54868 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.98□□□□□ -2.09
HMGCS2P54868 AL359821.1-201ENST00000605519 182 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 AC096772.1-201ENST00000609146 564 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 AC009248.2-201ENST00000619826 254 ntBASIC1.98□□□□□ -2.09
HMGCS2P54868 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HMGCS2P54868 RNU6-1285P-201ENST00000363480 105 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 Y_RNA.212-201ENST00000364177 102 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 SNORA32.2-201ENST00000384049 122 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 MIR186-201ENST00000384988 86 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 AL590632.1-201ENST00000424289 371 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 RPL39P29-201ENST00000447779 157 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 MTND1P11-201ENST00000456661 876 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 CYP2C59P-201ENST00000457790 269 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 snoU13.14-201ENST00000459372 104 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 RPS29P27-201ENST00000463711 170 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 AC068781.1-201ENST00000488231 618 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 TRBVA-201ENST00000498804 316 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 AL117351.2-201ENST00000513571 157 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 RN7SKP256-201ENST00000517201 314 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 DNAJC19P9-201ENST00000555084 351 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 SUB1P3-201ENST00000564581 315 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 CPDP1-201ENST00000579660 283 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 AL138963.2-201ENST00000605137 226 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 MIR6840-201ENST00000611937 71 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
HMGCS2P54868 AC009233.1-201ENST00000616477 371 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 MIR5739-201ENST00000619803 80 ntBASIC1.97□□□□□ -2.09
HMGCS2P54868 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMGCS2P54868 Y_RNA.279-201ENST00000364763 95 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 RNU6-128P-201ENST00000383976 107 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 RNU6-214P-201ENST00000384130 107 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 RNU1-57P-201ENST00000384491 166 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 RNU6-95P-201ENST00000384697 107 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 MIR1287-201ENST00000408492 90 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AC009161.1-201ENST00000417306 376 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AC138623.1-201ENST00000418060 216 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 UBE2V1P4-201ENST00000425374 344 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 MTCO3P46-201ENST00000425787 232 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 IFNA20P-201ENST00000436840 528 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 RNU7-95P-201ENST00000459222 64 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 RNU6-1037P-201ENST00000459571 107 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 RNU6-329P-201ENST00000459618 107 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AC090515.1-201ENST00000465295 476 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AC091874.1-201ENST00000511402 339 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.96□□□□□ -2.1
HMGCS2P54868 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS2P54868 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS2P54868 CBX3P7-201ENST00000532876 502 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.96□□□□□ -2.1
HMGCS2P54868 AC026371.1-201ENST00000551867 419 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 SCOCP1-201ENST00000554676 349 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.96□□□□□ -2.1
HMGCS2P54868 MIR3126-201ENST00000577443 74 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AC073410.2-201ENST00000603240 332 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 uc_338.15-201ENST00000615470 191 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AC009033.1-201ENST00000624279 431 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AL133216.2-202ENST00000634512 349 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 AC099654.14-201ENST00000638599 341 ntBASIC1.96□□□□□ -2.1
HMGCS2P54868 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms