Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC008739.2-201ENST00000597006 317 ntBASIC4.05□□□□□ -1.76
EPHA4P54764 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.05□□□□□ -1.76
EPHA4P54764 MIR548AY-201ENST00000617669 107 ntBASIC4.05□□□□□ -1.76
EPHA4P54764 AC068700.1-201ENST00000565862 3754 ntBASIC4.05□□□□□ -1.76
EPHA4P54764 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.05□□□□□ -1.76
EPHA4P54764 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
EPHA4P54764 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
EPHA4P54764 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
EPHA4P54764 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
EPHA4P54764 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
EPHA4P54764 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
EPHA4P54764 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
EPHA4P54764 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
EPHA4P54764 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
EPHA4P54764 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
EPHA4P54764 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.04□□□□□ -1.76
EPHA4P54764 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.04□□□□□ -1.76
EPHA4P54764 AL159152.1-201ENST00000635019 2587 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 RNA5SP388-201ENST00000362584 119 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 RNU6-271P-201ENST00000363858 105 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 RNA5SP130-201ENST00000364431 114 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 MIR29B2-201ENST00000385055 81 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 MT-TT-201ENST00000387460 66 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 SNORA12-201ENST00000391162 147 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 SNORA79-201ENST00000408376 140 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 RNU4-57P-201ENST00000515980 135 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 Y_RNA.686-201ENST00000516548 134 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 RNU6-1234P-201ENST00000516877 103 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 AC022655.2-201ENST00000577280 318 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 MIR4286-201ENST00000580651 93 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.04□□□□□ -1.76
EPHA4P54764 AC099778.2-201ENST00000610904 211 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 AC068647.2-201ENST00000637380 353 ntBASIC4.04□□□□□ -1.76
EPHA4P54764 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
EPHA4P54764 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
EPHA4P54764 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA4P54764 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA4P54764 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA4P54764 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA4P54764 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA4P54764 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
EPHA4P54764 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA4P54764 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA4P54764 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA4P54764 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
EPHA4P54764 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.03□□□□□ -1.76
EPHA4P54764 MIR873-201ENST00000401120 77 ntBASIC4.03□□□□□ -1.76
EPHA4P54764 MIR1185-2-201ENST00000408687 86 ntBASIC4.03□□□□□ -1.76
EPHA4P54764 RNA5SP38-201ENST00000410750 119 ntBASIC4.03□□□□□ -1.76
EPHA4P54764 AL117339.2-201ENST00000430475 180 ntBASIC4.03□□□□□ -1.76
EPHA4P54764 SNORA31.21-201ENST00000517180 77 ntBASIC4.03□□□□□ -1.76
EPHA4P54764 AP001328.1-201ENST00000528550 176 ntBASIC4.03□□□□□ -1.76
EPHA4P54764 MIR7151-201ENST00000617477 60 ntBASIC4.03□□□□□ -1.76
EPHA4P54764 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.03□□□□□ -1.76
EPHA4P54764 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.03□□□□□ -1.77
EPHA4P54764 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
EPHA4P54764 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.02□□□□□ -1.77
EPHA4P54764 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
EPHA4P54764 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.02□□□□□ -1.77
EPHA4P54764 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
EPHA4P54764 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
EPHA4P54764 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
EPHA4P54764 MIR372-201ENST00000362225 67 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 SNORA60-201ENST00000362396 134 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 RNU6-1325P-201ENST00000364905 105 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 Y_RNA.393-201ENST00000383936 102 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 RNU6-44P-201ENST00000384045 107 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 MIR513A2-201ENST00000385249 127 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 MIR300-201ENST00000401138 83 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 RPL21P65-201ENST00000406094 466 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 RN7SKP167-201ENST00000411047 285 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 AL162151.2-201ENST00000448875 158 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 HSPE1P13-201ENST00000451143 297 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 RPS26P15-201ENST00000488067 348 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
EPHA4P54764 AC026402.1-201ENST00000513642 170 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 RN7SKP179-201ENST00000516126 217 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.02□□□□□ -1.77
EPHA4P54764 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.02□□□□□ -1.77
EPHA4P54764 CYP4A43P-201ENST00000568156 121 ntBASIC4.02□□□□□ -1.77
EPHA4P54764 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
EPHA4P54764 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
EPHA4P54764 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
EPHA4P54764 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
EPHA4P54764 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
EPHA4P54764 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
EPHA4P54764 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.01□□□□□ -1.77
EPHA4P54764 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
EPHA4P54764 RNA5SP502-201ENST00000362694 119 ntBASIC4.01□□□□□ -1.77
EPHA4P54764 SNORA51.4-201ENST00000364993 124 ntBASIC4.01□□□□□ -1.77
EPHA4P54764 RNA5SP283-201ENST00000365604 119 ntBASIC4.01□□□□□ -1.77
EPHA4P54764 RNU6-1056P-201ENST00000383996 107 ntBASIC4.01□□□□□ -1.77
EPHA4P54764 SNORA11-201ENST00000408789 128 ntBASIC4.01□□□□□ -1.77
EPHA4P54764 SNORA36B-201ENST00000410438 131 ntBASIC4.01□□□□□ -1.77
EPHA4P54764 RPL23AP7-203ENST00000449021 469 ntBASIC4.01□□□□□ -1.77
EPHA4P54764 CENPBD1P1-201ENST00000464061 469 ntBASIC4.01□□□□□ -1.77
EPHA4P54764 AC117454.1-201ENST00000491120 168 ntBASIC4.01□□□□□ -1.77
EPHA4P54764 RNU7-115P-201ENST00000516433 55 ntBASIC4.01□□□□□ -1.77
EPHA4P54764 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.01□□□□□ -1.77
EPHA4P54764 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms