Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 SERF1AP1-201ENST00000514575 187 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 RNU1-143P-201ENST00000516296 146 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 AC104027.1-201ENST00000521887 300 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.35□□□□□ -1.87
ATXN1P54253 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.35□□□□□ -1.87
ATXN1P54253 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.35□□□□□ -1.87
ATXN1P54253 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.35□□□□□ -1.87
ATXN1P54253 MIR4435-1-201ENST00000582552 80 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.35□□□□□ -1.87
ATXN1P54253 AL645944.1-201ENST00000603857 493 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 BX284668.6-201ENST00000606899 438 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 U1.23-201ENST00000610293 146 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 RNU1-68P-201ENST00000615382 146 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 U1.39-201ENST00000621562 146 ntBASIC3.35□□□□□ -1.87
ATXN1P54253 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.35□□□□□ -1.87
ATXN1P54253 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
ATXN1P54253 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATXN1P54253 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.35□□□□□ -1.87
ATXN1P54253 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATXN1P54253 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.34□□□□□ -1.87
ATXN1P54253 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATXN1P54253 RNU4-82P-201ENST00000362443 140 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-37P-201ENST00000362692 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-11P-201ENST00000364234 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-25P-201ENST00000383873 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-1-201ENST00000383898 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-36P-201ENST00000384172 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-4P-201ENST00000384205 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-5P-201ENST00000384238 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-3P-201ENST00000384314 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-16P-201ENST00000384385 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-15P-201ENST00000384534 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-2-201ENST00000384627 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-29P-201ENST00000384637 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-9-201ENST00000384776 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 SNORA53-201ENST00000391141 249 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.34□□□□□ -1.87
ATXN1P54253 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.34□□□□□ -1.87
ATXN1P54253 AC098614.2-201ENST00000426040 255 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 AL365496.1-201ENST00000426885 215 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 SNORD116-28-201ENST00000516123 91 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-1338P-201ENST00000516328 91 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.34□□□□□ -1.87
ATXN1P54253 MRPS36P4-201ENST00000534436 298 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 SUB1P3-201ENST00000564581 315 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 RNU6-6P-201ENST00000606623 107 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 AC091895.1-201ENST00000624494 256 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.34□□□□□ -1.87
ATXN1P54253 RBBP8P1-201ENST00000449447 1844 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 MTND5P32-201ENST00000560711 1802 ntBASIC3.34□□□□□ -1.87
ATXN1P54253 AC092435.3-201ENST00000565538 3654 ntBASIC3.34□□□□□ -1.88
ATXN1P54253 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.34□□□□□ -1.88
ATXN1P54253 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
ATXN1P54253 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.33□□□□□ -1.88
ATXN1P54253 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATXN1P54253 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ATXN1P54253 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
ATXN1P54253 MTND5P9-201ENST00000503854 1755 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 Y_RNA.151-201ENST00000363566 112 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 Y_RNA.218-201ENST00000364218 104 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 Y_RNA.273-201ENST00000364703 102 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 RNU6-166P-201ENST00000384371 107 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 Y_RNA.568-201ENST00000384742 113 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 MIR517A-201ENST00000385001 87 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 MIR34A-201ENST00000385130 110 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 RNU6-1156P-201ENST00000410365 100 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 AL096701.2-201ENST00000416920 238 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 HMGN2P30-201ENST00000423237 256 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 BX276092.3-201ENST00000424182 230 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 RPL23AP58-201ENST00000440453 469 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 RPEP5-201ENST00000441137 268 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.33□□□□□ -1.88
ATXN1P54253 AC016925.1-201ENST00000458303 298 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 RPS4XP22-201ENST00000480755 780 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.33□□□□□ -1.88
ATXN1P54253 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
ATXN1P54253 MIR4769-201ENST00000584126 77 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 HMGN2P15-201ENST00000585707 270 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 uc_338.25-201ENST00000613756 156 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 U6.99-201ENST00000637524 83 ntBASIC3.33□□□□□ -1.88
ATXN1P54253 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
ATXN1P54253 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ATXN1P54253 AL136360.1-201ENST00000503377 1900 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ATXN1P54253 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATXN1P54253 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATXN1P54253 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ATXN1P54253 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 Y_RNA.541-201ENST00000384640 113 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 SNORA41-201ENST00000384675 132 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 RPS29P13-201ENST00000402041 169 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 RNU5E-9P-201ENST00000411164 104 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.32□□□□□ -1.88
ATXN1P54253 AL031274.1-201ENST00000450334 232 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 UBL5P3-201ENST00000475112 231 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 AC093852.1-201ENST00000503587 266 ntBASIC3.32□□□□□ -1.88
ATXN1P54253 Y_RNA.662-201ENST00000516028 97 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms