Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC021231.3-201ENST00000558497 370 ntBASIC2.91□□□□□ -1.94
COPAP53621 AC004584.2-201ENST00000570407 410 ntBASIC2.91□□□□□ -1.94
COPAP53621 AC006504.6-201ENST00000590142 199 ntBASIC2.91□□□□□ -1.94
COPAP53621 AC022432.1-201ENST00000595739 310 ntBASIC2.91□□□□□ -1.94
COPAP53621 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.91□□□□□ -1.94
COPAP53621 AC006157.1-201ENST00000611750 366 ntBASIC2.91□□□□□ -1.94
COPAP53621 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.91□□□□□ -1.94
COPAP53621 AC040896.1-201ENST00000613819 479 ntBASIC2.91□□□□□ -1.94
COPAP53621 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.91□□□□□ -1.94
COPAP53621 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.9□□□□□ -1.94
COPAP53621 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
COPAP53621 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
COPAP53621 RNU4-56P-201ENST00000364700 142 ntBASIC2.9□□□□□ -1.95
COPAP53621 AC117470.1-201ENST00000381974 330 ntBASIC2.9□□□□□ -1.95
COPAP53621 SNORA29-201ENST00000384183 140 ntBASIC2.9□□□□□ -1.95
COPAP53621 SNORA36A-201ENST00000384221 132 ntBASIC2.9□□□□□ -1.95
COPAP53621 MTCYBP2-201ENST00000407745 171 ntBASIC2.9□□□□□ -1.95
COPAP53621 RNU6-1156P-201ENST00000410365 100 ntBASIC2.9□□□□□ -1.95
COPAP53621 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
COPAP53621 MCFD2P1-201ENST00000417812 300 ntBASIC2.9□□□□□ -1.95
COPAP53621 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.9□□□□□ -1.95
COPAP53621 RPL30P4-201ENST00000429309 333 ntBASIC2.9□□□□□ -1.95
COPAP53621 AC092423.1-201ENST00000430165 186 ntBASIC2.9□□□□□ -1.95
COPAP53621 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.9□□□□□ -1.95
COPAP53621 AC073901.1-201ENST00000462471 408 ntBASIC2.9□□□□□ -1.95
COPAP53621 AL121594.1-201ENST00000475906 575 ntBASIC2.9□□□□□ -1.95
COPAP53621 AC090525.1-201ENST00000479116 478 ntBASIC2.9□□□□□ -1.95
COPAP53621 AC140059.1-201ENST00000489238 361 ntBASIC2.9□□□□□ -1.95
COPAP53621 AC105758.1-201ENST00000506038 399 ntBASIC2.9□□□□□ -1.95
COPAP53621 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.9□□□□□ -1.95
COPAP53621 RNU7-175P-201ENST00000515915 61 ntBASIC2.9□□□□□ -1.95
COPAP53621 RNU5F-2P-201ENST00000516066 82 ntBASIC2.9□□□□□ -1.95
COPAP53621 SNORA31.16-201ENST00000516773 139 ntBASIC2.9□□□□□ -1.95
COPAP53621 SCARNA3-201ENST00000517097 143 ntBASIC2.9□□□□□ -1.95
COPAP53621 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
COPAP53621 MIR5701-3-201ENST00000578890 82 ntBASIC2.9□□□□□ -1.95
COPAP53621 MIR5701-1-201ENST00000585138 82 ntBASIC2.9□□□□□ -1.95
COPAP53621 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
COPAP53621 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.9□□□□□ -1.95
COPAP53621 MIR5701-2-201ENST00000615634 82 ntBASIC2.9□□□□□ -1.95
COPAP53621 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
COPAP53621 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COPAP53621 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.89□□□□□ -1.95
COPAP53621 AC080128.1-201ENST00000474389 1917 ntBASIC2.89□□□□□ -1.95
COPAP53621 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
COPAP53621 Y_RNA.162-201ENST00000363683 102 ntBASIC2.89□□□□□ -1.95
COPAP53621 RNU1-115P-201ENST00000365329 160 ntBASIC2.89□□□□□ -1.95
COPAP53621 SNORA33.2-201ENST00000365413 134 ntBASIC2.89□□□□□ -1.95
COPAP53621 RNA5SP184-201ENST00000411071 108 ntBASIC2.89□□□□□ -1.95
COPAP53621 MRPS18CP6-201ENST00000423587 223 ntBASIC2.89□□□□□ -1.95
COPAP53621 AIMP1P2-201ENST00000425294 312 ntBASIC2.89□□□□□ -1.95
COPAP53621 MICF-203ENST00000432679 129 ntBASIC2.89□□□□□ -1.95
COPAP53621 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.89□□□□□ -1.95
COPAP53621 RPL39P40-201ENST00000445481 146 ntBASIC2.89□□□□□ -1.95
COPAP53621 MTND4P19-201ENST00000446659 478 ntBASIC2.89□□□□□ -1.95
COPAP53621 AL109933.2-201ENST00000452651 260 ntBASIC2.89□□□□□ -1.95
COPAP53621 RPS27AP9-201ENST00000477681 438 ntBASIC2.89□□□□□ -1.95
COPAP53621 SNORA25.10-201ENST00000515926 124 ntBASIC2.89□□□□□ -1.95
COPAP53621 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.89□□□□□ -1.95
COPAP53621 AC027176.1-201ENST00000560204 514 ntBASIC2.89□□□□□ -1.95
COPAP53621 AC023824.2-201ENST00000566185 400 ntBASIC2.89□□□□□ -1.95
COPAP53621 MIR3136-201ENST00000583498 78 ntBASIC2.89□□□□□ -1.95
COPAP53621 RPL30P11-203ENST00000598995 310 ntBASIC2.89□□□□□ -1.95
COPAP53621 AC092447.9-201ENST00000603395 144 ntBASIC2.89□□□□□ -1.95
COPAP53621 AL670379.2-201ENST00000604983 252 ntBASIC2.89□□□□□ -1.95
COPAP53621 SCARNA4-201ENST00000629045 128 ntBASIC2.89□□□□□ -1.95
COPAP53621 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
COPAP53621 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COPAP53621 MIR449A-201ENST00000362113 91 ntBASIC2.88□□□□□ -1.95
COPAP53621 Y_RNA.39-201ENST00000362620 98 ntBASIC2.88□□□□□ -1.95
COPAP53621 SNORA38-201ENST00000363946 132 ntBASIC2.88□□□□□ -1.95
COPAP53621 Y_RNA.364-201ENST00000365532 101 ntBASIC2.88□□□□□ -1.95
COPAP53621 RNU6-639P-201ENST00000384074 107 ntBASIC2.88□□□□□ -1.95
COPAP53621 RNY1P14-201ENST00000384426 108 ntBASIC2.88□□□□□ -1.95
COPAP53621 RNA5SP494-201ENST00000410653 129 ntBASIC2.88□□□□□ -1.95
COPAP53621 AL358453.1-201ENST00000422522 250 ntBASIC2.88□□□□□ -1.95
COPAP53621 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.88□□□□□ -1.95
COPAP53621 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.88□□□□□ -1.95
COPAP53621 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.88□□□□□ -1.95
COPAP53621 RPL23AP75-201ENST00000491601 451 ntBASIC2.88□□□□□ -1.95
COPAP53621 HMGB1P35-201ENST00000503360 598 ntBASIC2.88□□□□□ -1.95
COPAP53621 AC021146.2-201ENST00000504736 556 ntBASIC2.88□□□□□ -1.95
COPAP53621 AC023141.11-201ENST00000508864 202 ntBASIC2.88□□□□□ -1.95
COPAP53621 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.88□□□□□ -1.95
COPAP53621 Y_RNA.706-201ENST00000516933 99 ntBASIC2.88□□□□□ -1.95
COPAP53621 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.88□□□□□ -1.95
COPAP53621 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.88□□□□□ -1.95
COPAP53621 AC104581.2-201ENST00000572227 430 ntBASIC2.88□□□□□ -1.95
COPAP53621 MIR5571-201ENST00000577998 113 ntBASIC2.88□□□□□ -1.95
COPAP53621 AC100812.1-201ENST00000607622 580 ntBASIC2.88□□□□□ -1.95
COPAP53621 MIR1244-1-201ENST00000612829 85 ntBASIC2.88□□□□□ -1.95
COPAP53621 AC007485.1-201ENST00000616755 206 ntBASIC2.88□□□□□ -1.95
COPAP53621 AC091925.1-201ENST00000623204 462 ntBASIC2.88□□□□□ -1.95
COPAP53621 MIR1244-3-201ENST00000635744 85 ntBASIC2.88□□□□□ -1.95
COPAP53621 MIR1244-2-201ENST00000636449 85 ntBASIC2.88□□□□□ -1.95
COPAP53621 MIR1244-4-202ENST00000636813 85 ntBASIC2.88□□□□□ -1.95
COPAP53621 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.88□□□□□ -1.95
COPAP53621 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COPAP53621 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COPAP53621 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms