Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 SNORA20.2-201ENST00000383922 131 ntBASIC0.62□□□□□ -2.31
RPL28P46779 MIR19B1-201ENST00000384829 87 ntBASIC0.62□□□□□ -2.31
RPL28P46779 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.62□□□□□ -2.31
RPL28P46779 USP9YP28-201ENST00000435142 589 ntBASIC0.62□□□□□ -2.31
RPL28P46779 RAP1BP2-201ENST00000478270 544 ntBASIC0.62□□□□□ -2.31
RPL28P46779 UBE2V1P12-201ENST00000503954 474 ntBASIC0.62□□□□□ -2.31
RPL28P46779 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.62□□□□□ -2.31
RPL28P46779 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.62□□□□□ -2.31
RPL28P46779 RNU2-34P-201ENST00000516534 121 ntBASIC0.62□□□□□ -2.31
RPL28P46779 RNU6-567P-201ENST00000516746 107 ntBASIC0.62□□□□□ -2.31
RPL28P46779 AC090572.1-201ENST00000519251 160 ntBASIC0.62□□□□□ -2.31
RPL28P46779 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.62□□□□□ -2.31
RPL28P46779 AC022878.1-201ENST00000530684 149 ntBASIC0.62□□□□□ -2.31
RPL28P46779 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.62□□□□□ -2.31
RPL28P46779 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.62□□□□□ -2.31
RPL28P46779 AC090517.1-201ENST00000569307 266 ntBASIC0.62□□□□□ -2.31
RPL28P46779 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.62□□□□□ -2.31
RPL28P46779 AC091304.9-201ENST00000612091 226 ntBASIC0.62□□□□□ -2.31
RPL28P46779 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.62□□□□□ -2.31
RPL28P46779 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.62□□□□□ -2.31
RPL28P46779 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.62□□□□□ -2.31
RPL28P46779 AC068647.2-201ENST00000637380 353 ntBASIC0.62□□□□□ -2.31
RPL28P46779 BX322639.1-202ENST00000423987 2213 ntBASIC0.62□□□□□ -2.31
RPL28P46779 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RPL28P46779 RNU6-500P-201ENST00000362349 107 ntBASIC0.61□□□□□ -2.31
RPL28P46779 RNY1P10-201ENST00000363268 113 ntBASIC0.61□□□□□ -2.31
RPL28P46779 RNU4-38P-201ENST00000364472 129 ntBASIC0.61□□□□□ -2.31
RPL28P46779 RNU6-392P-201ENST00000364926 101 ntBASIC0.61□□□□□ -2.31
RPL28P46779 SNORA72.2-201ENST00000365028 127 ntBASIC0.61□□□□□ -2.31
RPL28P46779 RNU1-36P-201ENST00000365130 165 ntBASIC0.61□□□□□ -2.31
RPL28P46779 RNA5SP259-201ENST00000365541 109 ntBASIC0.61□□□□□ -2.31
RPL28P46779 RNU2-8P-201ENST00000410727 190 ntBASIC0.61□□□□□ -2.31
RPL28P46779 AL008987.1-201ENST00000415528 237 ntBASIC0.61□□□□□ -2.31
RPL28P46779 POLR2J4-204ENST00000418424 324 ntBASIC0.61□□□□□ -2.31
RPL28P46779 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.61□□□□□ -2.31
RPL28P46779 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.61□□□□□ -2.31
RPL28P46779 PRPS1P1-201ENST00000445305 876 ntBASIC0.61□□□□□ -2.31
RPL28P46779 MTCYBP1-201ENST00000454315 1119 ntBASIC0.61□□□□□ -2.31
RPL28P46779 MTCO2P6-201ENST00000463134 685 ntBASIC0.61□□□□□ -2.31
RPL28P46779 AC008628.2-201ENST00000502605 298 ntBASIC0.61□□□□□ -2.31
RPL28P46779 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.61□□□□□ -2.31
RPL28P46779 TRMT112P2-201ENST00000512910 132 ntBASIC0.61□□□□□ -2.31
RPL28P46779 RNU6-1178P-201ENST00000516674 107 ntBASIC0.61□□□□□ -2.31
RPL28P46779 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.61□□□□□ -2.31
RPL28P46779 TMF1P1-201ENST00000576058 373 ntBASIC0.61□□□□□ -2.31
RPL28P46779 MIR4498-201ENST00000577599 66 ntBASIC0.61□□□□□ -2.31
RPL28P46779 MIR4661-201ENST00000582720 75 ntBASIC0.61□□□□□ -2.31
RPL28P46779 AC005771.1-201ENST00000585581 349 ntBASIC0.61□□□□□ -2.31
RPL28P46779 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.61□□□□□ -2.31
RPL28P46779 AC112191.3-201ENST00000604371 277 ntBASIC0.61□□□□□ -2.31
RPL28P46779 AC016727.1-205ENST00000605437 569 ntBASIC0.61□□□□□ -2.31
RPL28P46779 Z99289.3-201ENST00000605586 594 ntBASIC0.61□□□□□ -2.31
RPL28P46779 AC064807.4-201ENST00000607201 407 ntBASIC0.61□□□□□ -2.31
RPL28P46779 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.61□□□□□ -2.31
RPL28P46779 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RPL28P46779 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.61□□□□□ -2.31
RPL28P46779 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.6□□□□□ -2.31
RPL28P46779 RNU6-545P-201ENST00000362681 104 ntBASIC0.6□□□□□ -2.31
RPL28P46779 RNU6-418P-201ENST00000384035 107 ntBASIC0.6□□□□□ -2.31
RPL28P46779 MIR146A-201ENST00000385201 99 ntBASIC0.6□□□□□ -2.31
RPL28P46779 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.6□□□□□ -2.31
RPL28P46779 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.6□□□□□ -2.31
RPL28P46779 HSFY7P-201ENST00000432672 318 ntBASIC0.6□□□□□ -2.31
RPL28P46779 HSFY8P-201ENST00000437934 318 ntBASIC0.6□□□□□ -2.31
RPL28P46779 Z73417.1-201ENST00000447373 778 ntBASIC0.6□□□□□ -2.31
RPL28P46779 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.6□□□□□ -2.31
RPL28P46779 C1DP4-201ENST00000455429 424 ntBASIC0.6□□□□□ -2.31
RPL28P46779 COX6CP14-201ENST00000469580 174 ntBASIC0.6□□□□□ -2.31
RPL28P46779 MTCO3P7-201ENST00000510008 774 ntBASIC0.6□□□□□ -2.31
RPL28P46779 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.6□□□□□ -2.31
RPL28P46779 AC091874.1-201ENST00000511402 339 ntBASIC0.6□□□□□ -2.31
RPL28P46779 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
RPL28P46779 LRRC34P2-201ENST00000514850 553 ntBASIC0.6□□□□□ -2.31
RPL28P46779 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.6□□□□□ -2.31
RPL28P46779 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.6□□□□□ -2.31
RPL28P46779 AC091805.2-201ENST00000603848 235 ntBASIC0.6□□□□□ -2.31
RPL28P46779 AC008250.2-201ENST00000615261 205 ntBASIC0.6□□□□□ -2.31
RPL28P46779 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
RPL28P46779 AC027807.2-201ENST00000616099 408 ntBASIC0.6□□□□□ -2.31
RPL28P46779 AC009509.4-201ENST00000619202 509 ntBASIC0.6□□□□□ -2.31
RPL28P46779 AL136221.1-201ENST00000621449 509 ntBASIC0.6□□□□□ -2.31
RPL28P46779 SNORA43.4-201ENST00000629559 138 ntBASIC0.6□□□□□ -2.31
RPL28P46779 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.6□□□□□ -2.31
RPL28P46779 MTND4P9-201ENST00000507819 1346 ntBASIC0.6□□□□□ -2.31
RPL28P46779 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
RPL28P46779 RNU5E-5P-201ENST00000365379 116 ntBASIC0.59□□□□□ -2.31
RPL28P46779 Y_RNA.367-201ENST00000365544 101 ntBASIC0.59□□□□□ -2.31
RPL28P46779 SNORA36A-201ENST00000384221 132 ntBASIC0.59□□□□□ -2.31
RPL28P46779 MIR300-201ENST00000401138 83 ntBASIC0.59□□□□□ -2.31
RPL28P46779 MIR208B-201ENST00000401172 77 ntBASIC0.59□□□□□ -2.31
RPL28P46779 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.59□□□□□ -2.31
RPL28P46779 AC010099.3-201ENST00000423896 409 ntBASIC0.59□□□□□ -2.31
RPL28P46779 MTCO2P23-201ENST00000425216 680 ntBASIC0.59□□□□□ -2.31
RPL28P46779 AL356583.2-201ENST00000426536 280 ntBASIC0.59□□□□□ -2.31
RPL28P46779 AC104850.1-201ENST00000435940 476 ntBASIC0.59□□□□□ -2.31
RPL28P46779 TAF9P1-201ENST00000445421 515 ntBASIC0.59□□□□□ -2.31
RPL28P46779 USP9YP12-201ENST00000450481 570 ntBASIC0.59□□□□□ -2.31
RPL28P46779 AL133217.1-201ENST00000450980 425 ntBASIC0.59□□□□□ -2.31
RPL28P46779 TAF9P2-201ENST00000454958 515 ntBASIC0.59□□□□□ -2.31
RPL28P46779 RNU7-34P-201ENST00000459394 64 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms