Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MIR1289-1-201ENST00000408836 144 ntBASIC2.88□□□□□ -1.95
MMP13P45452 RNU2-20P-201ENST00000410425 191 ntBASIC2.88□□□□□ -1.95
MMP13P45452 RNU2-25P-201ENST00000411041 191 ntBASIC2.88□□□□□ -1.95
MMP13P45452 AL358453.1-201ENST00000422522 250 ntBASIC2.88□□□□□ -1.95
MMP13P45452 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.88□□□□□ -1.95
MMP13P45452 AL031659.1-201ENST00000447075 539 ntBASIC2.88□□□□□ -1.95
MMP13P45452 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.88□□□□□ -1.95
MMP13P45452 TOMM22P6-201ENST00000465035 409 ntBASIC2.88□□□□□ -1.95
MMP13P45452 RPL39P38-201ENST00000467018 153 ntBASIC2.88□□□□□ -1.95
MMP13P45452 AC003982.1-202ENST00000469928 248 ntBASIC2.88□□□□□ -1.95
MMP13P45452 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.88□□□□□ -1.95
MMP13P45452 RPL30P1-201ENST00000488676 339 ntBASIC2.88□□□□□ -1.95
MMP13P45452 SNORA43.2-201ENST00000516652 128 ntBASIC2.88□□□□□ -1.95
MMP13P45452 AP002770.2-201ENST00000543613 532 ntBASIC2.88□□□□□ -1.95
MMP13P45452 MIR4782-201ENST00000577987 79 ntBASIC2.88□□□□□ -1.95
MMP13P45452 MIR3670-2-201ENST00000582974 65 ntBASIC2.88□□□□□ -1.95
MMP13P45452 MIR3670-1-201ENST00000584160 65 ntBASIC2.88□□□□□ -1.95
MMP13P45452 MIR3670-3-201ENST00000584855 65 ntBASIC2.88□□□□□ -1.95
MMP13P45452 RPS29P30-201ENST00000600975 111 ntBASIC2.88□□□□□ -1.95
MMP13P45452 MIR3670-4-201ENST00000612260 65 ntBASIC2.88□□□□□ -1.95
MMP13P45452 U6.99-201ENST00000637524 83 ntBASIC2.88□□□□□ -1.95
MMP13P45452 AC241585.2-209ENST00000638217 143 ntBASIC2.88□□□□□ -1.95
MMP13P45452 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.88□□□□□ -1.95
MMP13P45452 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
MMP13P45452 AC092593.1-201ENST00000515413 1815 ntBASIC2.88□□□□□ -1.95
MMP13P45452 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
MMP13P45452 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
MMP13P45452 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.87□□□□□ -1.95
MMP13P45452 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
MMP13P45452 RNU1-76P-201ENST00000362903 159 ntBASIC2.87□□□□□ -1.95
MMP13P45452 Y_RNA.237-201ENST00000364439 102 ntBASIC2.87□□□□□ -1.95
MMP13P45452 RNU6-898P-201ENST00000365627 104 ntBASIC2.87□□□□□ -1.95
MMP13P45452 RNU6-217P-201ENST00000384164 104 ntBASIC2.87□□□□□ -1.95
MMP13P45452 MIR34A-201ENST00000385130 110 ntBASIC2.87□□□□□ -1.95
MMP13P45452 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
MMP13P45452 MTCO3P19-201ENST00000415864 321 ntBASIC2.87□□□□□ -1.95
MMP13P45452 SDAD1P3-201ENST00000427380 333 ntBASIC2.87□□□□□ -1.95
MMP13P45452 MTND2P29-201ENST00000438595 412 ntBASIC2.87□□□□□ -1.95
MMP13P45452 SUMO1P2-201ENST00000452524 304 ntBASIC2.87□□□□□ -1.95
MMP13P45452 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
MMP13P45452 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.87□□□□□ -1.95
MMP13P45452 RNU6-138P-201ENST00000515952 107 ntBASIC2.87□□□□□ -1.95
MMP13P45452 RNU1-103P-201ENST00000516502 125 ntBASIC2.87□□□□□ -1.95
MMP13P45452 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.87□□□□□ -1.95
MMP13P45452 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.87□□□□□ -1.95
MMP13P45452 AL442163.3-201ENST00000554110 156 ntBASIC2.87□□□□□ -1.95
MMP13P45452 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.87□□□□□ -1.95
MMP13P45452 AC104581.2-201ENST00000572227 430 ntBASIC2.87□□□□□ -1.95
MMP13P45452 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.87□□□□□ -1.95
MMP13P45452 FTX_3.1-201ENST00000610451 147 ntBASIC2.87□□□□□ -1.95
MMP13P45452 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MMP13P45452 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MMP13P45452 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.86□□□□□ -1.95
MMP13P45452 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
MMP13P45452 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.86□□□□□ -1.95
MMP13P45452 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MMP13P45452 RNU6-270P-201ENST00000364131 105 ntBASIC2.86□□□□□ -1.95
MMP13P45452 SNORD21-201ENST00000383953 95 ntBASIC2.86□□□□□ -1.95
MMP13P45452 SNORA18.3-201ENST00000384122 132 ntBASIC2.86□□□□□ -1.95
MMP13P45452 RNU6-102P-201ENST00000384485 104 ntBASIC2.86□□□□□ -1.95
MMP13P45452 Y_RNA.526-201ENST00000384572 110 ntBASIC2.86□□□□□ -1.95
MMP13P45452 MIR487A-201ENST00000385009 80 ntBASIC2.86□□□□□ -1.95
MMP13P45452 SNORD115-46-201ENST00000390982 71 ntBASIC2.86□□□□□ -1.95
MMP13P45452 AP000275.1-201ENST00000411943 390 ntBASIC2.86□□□□□ -1.95
MMP13P45452 HMGN2P30-201ENST00000423237 256 ntBASIC2.86□□□□□ -1.95
MMP13P45452 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.86□□□□□ -1.95
MMP13P45452 AC243964.1-201ENST00000441814 261 ntBASIC2.86□□□□□ -1.95
MMP13P45452 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.86□□□□□ -1.95
MMP13P45452 snoU13.28-201ENST00000459235 104 ntBASIC2.86□□□□□ -1.95
MMP13P45452 RNU7-87P-201ENST00000459343 62 ntBASIC2.86□□□□□ -1.95
MMP13P45452 AC090525.1-201ENST00000479116 478 ntBASIC2.86□□□□□ -1.95
MMP13P45452 HMGB1P35-201ENST00000503360 598 ntBASIC2.86□□□□□ -1.95
MMP13P45452 RNU6-928P-201ENST00000516876 104 ntBASIC2.86□□□□□ -1.95
MMP13P45452 RNA5SP291-201ENST00000517222 105 ntBASIC2.86□□□□□ -1.95
MMP13P45452 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.86□□□□□ -1.95
MMP13P45452 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.86□□□□□ -1.95
MMP13P45452 MIR4300-201ENST00000581016 96 ntBASIC2.86□□□□□ -1.95
MMP13P45452 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.86□□□□□ -1.95
MMP13P45452 AC020895.1-201ENST00000595362 272 ntBASIC2.86□□□□□ -1.95
MMP13P45452 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.86□□□□□ -1.95
MMP13P45452 AC011476.5-201ENST00000615594 130 ntBASIC2.86□□□□□ -1.95
MMP13P45452 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MMP13P45452 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MMP13P45452 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MMP13P45452 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
MMP13P45452 MIR26A1-201ENST00000362205 77 ntBASIC2.85□□□□□ -1.95
MMP13P45452 SNORA20.1-201ENST00000364790 130 ntBASIC2.85□□□□□ -1.95
MMP13P45452 RNU6-338P-201ENST00000383888 105 ntBASIC2.85□□□□□ -1.95
MMP13P45452 RNU6-209P-201ENST00000384118 107 ntBASIC2.85□□□□□ -1.95
MMP13P45452 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.85□□□□□ -1.95
MMP13P45452 U3.37-201ENST00000408528 213 ntBASIC2.85□□□□□ -1.95
MMP13P45452 AL590135.1-201ENST00000422215 156 ntBASIC2.85□□□□□ -1.95
MMP13P45452 TOMM20P4-201ENST00000427861 435 ntBASIC2.85□□□□□ -1.95
MMP13P45452 RPL23AP58-201ENST00000440453 469 ntBASIC2.85□□□□□ -1.95
MMP13P45452 AL135938.1-201ENST00000443141 297 ntBASIC2.85□□□□□ -1.95
MMP13P45452 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.85□□□□□ -1.95
MMP13P45452 RN7SKP210-201ENST00000459176 261 ntBASIC2.85□□□□□ -1.95
MMP13P45452 RPS29P20-201ENST00000489592 171 ntBASIC2.85□□□□□ -1.95
MMP13P45452 RPL23AP75-201ENST00000491601 451 ntBASIC2.85□□□□□ -1.95
MMP13P45452 AF186996.7-201ENST00000492781 209 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms