Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.45□□□□□ -2.18
SSR1P43307 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SSR1P43307 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
SSR1P43307 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.44□□□□□ -2.18
SSR1P43307 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SSR1P43307 RNU6-545P-201ENST00000362681 104 ntBASIC1.44□□□□□ -2.18
SSR1P43307 RNU6-203P-201ENST00000384038 104 ntBASIC1.44□□□□□ -2.18
SSR1P43307 Y_RNA.480-201ENST00000384364 102 ntBASIC1.44□□□□□ -2.18
SSR1P43307 MIR618-201ENST00000385287 98 ntBASIC1.44□□□□□ -2.18
SSR1P43307 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
SSR1P43307 RN7SKP61-201ENST00000410642 295 ntBASIC1.44□□□□□ -2.18
SSR1P43307 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.44□□□□□ -2.18
SSR1P43307 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.44□□□□□ -2.18
SSR1P43307 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SSR1P43307 AL133396.1-201ENST00000432048 687 ntBASIC1.44□□□□□ -2.18
SSR1P43307 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
SSR1P43307 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.44□□□□□ -2.18
SSR1P43307 snoU13.9-201ENST00000458927 103 ntBASIC1.44□□□□□ -2.18
SSR1P43307 RNU7-167P-201ENST00000459160 62 ntBASIC1.44□□□□□ -2.18
SSR1P43307 AC010531.2-201ENST00000465012 153 ntBASIC1.44□□□□□ -2.18
SSR1P43307 RNU6-323P-201ENST00000521915 107 ntBASIC1.44□□□□□ -2.18
SSR1P43307 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.44□□□□□ -2.18
SSR1P43307 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.44□□□□□ -2.18
SSR1P43307 AL137161.1-201ENST00000532231 390 ntBASIC1.44□□□□□ -2.18
SSR1P43307 AP003034.1-201ENST00000534621 422 ntBASIC1.44□□□□□ -2.18
SSR1P43307 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.44□□□□□ -2.18
SSR1P43307 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.44□□□□□ -2.18
SSR1P43307 HMGB1P33-201ENST00000563485 527 ntBASIC1.44□□□□□ -2.18
SSR1P43307 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.44□□□□□ -2.18
SSR1P43307 MIR4303-201ENST00000581299 66 ntBASIC1.44□□□□□ -2.18
SSR1P43307 AL391646.1-201ENST00000603860 190 ntBASIC1.44□□□□□ -2.18
SSR1P43307 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SSR1P43307 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SSR1P43307 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SSR1P43307 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SSR1P43307 AP000560.1-201ENST00000624150 1937 ntBASIC1.43□□□□□ -2.18
SSR1P43307 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SSR1P43307 RNU6-271P-201ENST00000363858 105 ntBASIC1.43□□□□□ -2.18
SSR1P43307 SNORA18.2-201ENST00000383865 132 ntBASIC1.43□□□□□ -2.18
SSR1P43307 RNU6-418P-201ENST00000384035 107 ntBASIC1.43□□□□□ -2.18
SSR1P43307 RNA5SP219-201ENST00000390940 113 ntBASIC1.43□□□□□ -2.18
SSR1P43307 SNORA67.5-201ENST00000391036 107 ntBASIC1.43□□□□□ -2.18
SSR1P43307 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.43□□□□□ -2.18
SSR1P43307 AL353193.1-201ENST00000421444 268 ntBASIC1.43□□□□□ -2.18
SSR1P43307 AC078809.1-201ENST00000427601 140 ntBASIC1.43□□□□□ -2.18
SSR1P43307 AC015922.2-201ENST00000435593 184 ntBASIC1.43□□□□□ -2.18
SSR1P43307 AL121601.2-201ENST00000438019 707 ntBASIC1.43□□□□□ -2.18
SSR1P43307 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.43□□□□□ -2.18
SSR1P43307 RNU7-180P-201ENST00000459240 63 ntBASIC1.43□□□□□ -2.18
SSR1P43307 RPL9P9-202ENST00000466501 579 ntBASIC1.43□□□□□ -2.18
SSR1P43307 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.43□□□□□ -2.18
SSR1P43307 RNA5SP445-201ENST00000515889 115 ntBASIC1.43□□□□□ -2.18
SSR1P43307 RN7SKP179-201ENST00000516126 217 ntBASIC1.43□□□□□ -2.18
SSR1P43307 RNU6-1041P-201ENST00000516254 102 ntBASIC1.43□□□□□ -2.18
SSR1P43307 RNU6-902P-201ENST00000517212 91 ntBASIC1.43□□□□□ -2.18
SSR1P43307 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.43□□□□□ -2.18
SSR1P43307 MTCO3P23-201ENST00000561363 289 ntBASIC1.43□□□□□ -2.18
SSR1P43307 AL391840.1-201ENST00000571144 367 ntBASIC1.43□□□□□ -2.18
SSR1P43307 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.43□□□□□ -2.18
SSR1P43307 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.43□□□□□ -2.18
SSR1P43307 MIR8063-201ENST00000621930 81 ntBASIC1.43□□□□□ -2.18
SSR1P43307 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SSR1P43307 MTND4P14-201ENST00000435799 1354 ntBASIC1.43□□□□□ -2.18
SSR1P43307 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SSR1P43307 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.42□□□□□ -2.18
SSR1P43307 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
SSR1P43307 MTND5P9-201ENST00000503854 1755 ntBASIC1.42□□□□□ -2.18
SSR1P43307 AL159152.1-201ENST00000635019 2587 ntBASIC1.42□□□□□ -2.18
SSR1P43307 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
SSR1P43307 RNU4-56P-201ENST00000364700 142 ntBASIC1.42□□□□□ -2.18
SSR1P43307 SNORA25.8-201ENST00000364831 128 ntBASIC1.42□□□□□ -2.18
SSR1P43307 RNU6-877P-201ENST00000383868 107 ntBASIC1.42□□□□□ -2.18
SSR1P43307 SNORA26.3-201ENST00000391119 136 ntBASIC1.42□□□□□ -2.18
SSR1P43307 RNU2-29P-201ENST00000410423 189 ntBASIC1.42□□□□□ -2.18
SSR1P43307 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.42□□□□□ -2.18
SSR1P43307 AC245047.4-201ENST00000433189 144 ntBASIC1.42□□□□□ -2.18
SSR1P43307 HSPE1P9-201ENST00000440046 311 ntBASIC1.42□□□□□ -2.18
SSR1P43307 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.42□□□□□ -2.18
SSR1P43307 AC022364.2-201ENST00000457963 554 ntBASIC1.42□□□□□ -2.18
SSR1P43307 AC007547.1-201ENST00000462177 490 ntBASIC1.42□□□□□ -2.18
SSR1P43307 AC016632.1-201ENST00000503994 196 ntBASIC1.42□□□□□ -2.18
SSR1P43307 AC104576.1-201ENST00000524225 88 ntBASIC1.42□□□□□ -2.18
SSR1P43307 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.42□□□□□ -2.18
SSR1P43307 HULC.1-201ENST00000612720 240 ntBASIC1.42□□□□□ -2.18
SSR1P43307 AL354950.2-201ENST00000617939 290 ntBASIC1.42□□□□□ -2.18
SSR1P43307 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SSR1P43307 ZNF209P-201ENST00000593450 2304 ntBASIC1.41□□□□□ -2.18
SSR1P43307 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SSR1P43307 RNU6-457P-201ENST00000363999 107 ntBASIC1.41□□□□□ -2.18
SSR1P43307 RNU6-331P-201ENST00000384724 107 ntBASIC1.41□□□□□ -2.18
SSR1P43307 RNA5SP213-201ENST00000391031 106 ntBASIC1.41□□□□□ -2.18
SSR1P43307 RNU6-1093P-201ENST00000391194 107 ntBASIC1.41□□□□□ -2.18
SSR1P43307 MTND3P9-201ENST00000429526 346 ntBASIC1.41□□□□□ -2.18
SSR1P43307 MTND1P26-201ENST00000440488 538 ntBASIC1.41□□□□□ -2.18
SSR1P43307 AC073415.1-201ENST00000449240 153 ntBASIC1.41□□□□□ -2.18
SSR1P43307 RNU1-131P-201ENST00000458943 161 ntBASIC1.41□□□□□ -2.18
SSR1P43307 OR2A41P-201ENST00000473586 105 ntBASIC1.41□□□□□ -2.18
SSR1P43307 HMGN2P9-201ENST00000476875 229 ntBASIC1.41□□□□□ -2.18
SSR1P43307 BET1P1-201ENST00000482276 359 ntBASIC1.41□□□□□ -2.18
SSR1P43307 AC019176.1-201ENST00000518519 225 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms