Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC093023.1-201ENST00000547375 507 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.4□□□□□ -2.47
HTTP42858 AC124947.2-202ENST00000552735 133 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC027288.2-201ENST00000553028 243 ntBASIC-0.4□□□□□ -2.47
HTTP42858 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.4□□□□□ -2.47
HTTP42858 AC004853.1-201ENST00000604902 698 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC242628.1-201ENST00000606810 391 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC016542.1-201ENST00000608259 493 ntBASIC-0.4□□□□□ -2.47
HTTP42858 UBE2Q2P6-201ENST00000612666 153 ntBASIC-0.4□□□□□ -2.47
HTTP42858 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.4□□□□□ -2.47
HTTP42858 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
HTTP42858 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.4□□□□□ -2.47
HTTP42858 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.4□□□□□ -2.47
HTTP42858 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.4□□□□□ -2.47
HTTP42858 MTND2P21-201ENST00000436242 1042 ntBASIC-0.4□□□□□ -2.47
HTTP42858 AC068135.1-201ENST00000446164 246 ntBASIC-0.4□□□□□ -2.47
HTTP42858 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-0.4□□□□□ -2.47
HTTP42858 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.4□□□□□ -2.47
HTTP42858 AC120349.3-201ENST00000624377 529 ntBASIC-0.4□□□□□ -2.47
HTTP42858 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-0.41□□□□□ -2.47
HTTP42858 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.41□□□□□ -2.47
HTTP42858 SNORA4.2-201ENST00000365313 147 ntBASIC-0.41□□□□□ -2.47
HTTP42858 RNU6-505P-201ENST00000384427 107 ntBASIC-0.41□□□□□ -2.47
HTTP42858 MIR1303-201ENST00000408625 86 ntBASIC-0.41□□□□□ -2.47
HTTP42858 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.41□□□□□ -2.47
HTTP42858 MTND1P17-201ENST00000448961 204 ntBASIC-0.41□□□□□ -2.47
HTTP42858 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.41□□□□□ -2.47
HTTP42858 AC010460.2-201ENST00000509054 677 ntBASIC-0.41□□□□□ -2.47
HTTP42858 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.41□□□□□ -2.47
HTTP42858 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-0.41□□□□□ -2.47
HTTP42858 RN7SL660P-201ENST00000614852 299 ntBASIC-0.41□□□□□ -2.47
HTTP42858 AL357080.1-201ENST00000617394 239 ntBASIC-0.41□□□□□ -2.47
HTTP42858 RNU6-369P-201ENST00000362515 102 ntBASIC-0.41□□□□□ -2.48
HTTP42858 RNA5SP517-201ENST00000364724 117 ntBASIC-0.41□□□□□ -2.48
HTTP42858 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-0.41□□□□□ -2.48
HTTP42858 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-0.41□□□□□ -2.48
HTTP42858 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.41□□□□□ -2.48
HTTP42858 DEFB108D-201ENST00000527787 222 ntBASIC-0.41□□□□□ -2.48
HTTP42858 AP001328.1-201ENST00000528550 176 ntBASIC-0.41□□□□□ -2.48
HTTP42858 MIR3169-201ENST00000578032 83 ntBASIC-0.41□□□□□ -2.48
HTTP42858 VN1R83P-201ENST00000595685 445 ntBASIC-0.41□□□□□ -2.48
HTTP42858 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.42□□□□□ -2.48
HTTP42858 RNU6-747P-201ENST00000390928 104 ntBASIC-0.42□□□□□ -2.48
HTTP42858 RNU6-241P-201ENST00000391148 104 ntBASIC-0.42□□□□□ -2.48
HTTP42858 RNU6-177P-201ENST00000411257 104 ntBASIC-0.42□□□□□ -2.48
HTTP42858 MTCO1P21-201ENST00000416634 589 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.42□□□□□ -2.48
HTTP42858 RPL31P53-201ENST00000457065 348 ntBASIC-0.42□□□□□ -2.48
HTTP42858 MTCO3P2-201ENST00000457365 171 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC022483.1-201ENST00000514020 567 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC-0.42□□□□□ -2.48
HTTP42858 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.42□□□□□ -2.48
HTTP42858 AC079598.5-201ENST00000547460 117 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC137800.2-201ENST00000574375 120 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC004067.1-201ENST00000608733 700 ntBASIC-0.42□□□□□ -2.48
HTTP42858 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.42□□□□□ -2.48
HTTP42858 MTND2P41-201ENST00000637599 773 ntBASIC-0.42□□□□□ -2.48
HTTP42858 RNU4-84P-201ENST00000364200 139 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AL034345.1-201ENST00000407768 123 ntBASIC-0.42□□□□□ -2.48
HTTP42858 RNU4-27P-201ENST00000410889 139 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.42□□□□□ -2.48
HTTP42858 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.42□□□□□ -2.48
HTTP42858 AL590383.1-201ENST00000428602 75 ntBASIC-0.42□□□□□ -2.48
HTTP42858 TXNL1P1-201ENST00000429528 554 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AL162725.1-201ENST00000435405 301 ntBASIC-0.42□□□□□ -2.48
HTTP42858 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.42□□□□□ -2.48
HTTP42858 RNU1-131P-201ENST00000458943 161 ntBASIC-0.42□□□□□ -2.48
HTTP42858 SCARNA18-201ENST00000459004 134 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC024589.1-201ENST00000512207 263 ntBASIC-0.42□□□□□ -2.48
HTTP42858 RNA5SP268-201ENST00000516828 124 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC105029.1-201ENST00000520250 669 ntBASIC-0.42□□□□□ -2.48
HTTP42858 MIR548AO-201ENST00000579992 96 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC018462.2-201ENST00000605375 395 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.42□□□□□ -2.48
HTTP42858 MIR6738-201ENST00000619620 64 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC098679.4-201ENST00000624241 654 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-0.42□□□□□ -2.48
HTTP42858 MTND2P33-201ENST00000506452 1031 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.42□□□□□ -2.48
HTTP42858 AC098483.2-201ENST00000603158 454 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AC104695.3-201ENST00000604052 296 ntBASIC-0.42□□□□□ -2.48
HTTP42858 AL603758.1-201ENST00000618654 241 ntBASIC-0.42□□□□□ -2.48
HTTP42858 MIR1-1-201ENST00000362147 71 ntBASIC-0.43□□□□□ -2.48
HTTP42858 SNORA40.8-201ENST00000411034 126 ntBASIC-0.43□□□□□ -2.48
HTTP42858 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.43□□□□□ -2.48
HTTP42858 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.43□□□□□ -2.48
HTTP42858 RPL31P54-201ENST00000429803 370 ntBASIC-0.43□□□□□ -2.48
HTTP42858 MTND2P24-201ENST00000453434 806 ntBASIC-0.43□□□□□ -2.48
HTTP42858 HMGN2P26-201ENST00000463169 339 ntBASIC-0.43□□□□□ -2.48
HTTP42858 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.43□□□□□ -2.48
HTTP42858 RNU2-60P-201ENST00000517290 128 ntBASIC-0.43□□□□□ -2.48
HTTP42858 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.43□□□□□ -2.48
HTTP42858 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.43□□□□□ -2.48
HTTP42858 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-0.43□□□□□ -2.48
HTTP42858 AC009268.2-201ENST00000621925 457 ntBASIC-0.43□□□□□ -2.48
HTTP42858 AP003400.6-201ENST00000624698 740 ntBASIC-0.43□□□□□ -2.48
HTTP42858 MIR573-201ENST00000384964 99 ntBASIC-0.43□□□□□ -2.48
HTTP42858 AL353621.1-201ENST00000418219 243 ntBASIC-0.43□□□□□ -2.48
HTTP42858 USP9YP22-201ENST00000438971 294 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms