Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MTCO2P16-201ENST00000436962 677 ntBASIC1.48□□□□□ -2.17
RORAP35398 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.48□□□□□ -2.17
RORAP35398 AL035666.1-201ENST00000446195 348 ntBASIC1.48□□□□□ -2.17
RORAP35398 RNU7-95P-201ENST00000459222 64 ntBASIC1.48□□□□□ -2.17
RORAP35398 AL163973.1-201ENST00000484753 577 ntBASIC1.48□□□□□ -2.17
RORAP35398 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.48□□□□□ -2.17
RORAP35398 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.48□□□□□ -2.17
RORAP35398 RPL39P5-202ENST00000512505 151 ntBASIC1.48□□□□□ -2.17
RORAP35398 AC069113.1-201ENST00000517763 267 ntBASIC1.48□□□□□ -2.17
RORAP35398 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.48□□□□□ -2.17
RORAP35398 AC087441.2-201ENST00000529141 262 ntBASIC1.48□□□□□ -2.17
RORAP35398 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.48□□□□□ -2.17
RORAP35398 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.48□□□□□ -2.17
RORAP35398 AC006362.1-201ENST00000567392 174 ntBASIC1.48□□□□□ -2.17
RORAP35398 AP005136.1-201ENST00000579765 429 ntBASIC1.48□□□□□ -2.17
RORAP35398 MIR3941-201ENST00000582572 103 ntBASIC1.48□□□□□ -2.17
RORAP35398 AC073648.5-201ENST00000603502 305 ntBASIC1.48□□□□□ -2.17
RORAP35398 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
RORAP35398 AL512598.1-201ENST00000610158 273 ntBASIC1.48□□□□□ -2.17
RORAP35398 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.48□□□□□ -2.17
RORAP35398 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.48□□□□□ -2.17
RORAP35398 uc_338.34-201ENST00000617467 174 ntBASIC1.48□□□□□ -2.17
RORAP35398 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.48□□□□□ -2.17
RORAP35398 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
RORAP35398 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RORAP35398 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RORAP35398 CBX3P1-201ENST00000325243 554 ntBASIC1.47□□□□□ -2.17
RORAP35398 RNU1-42P-201ENST00000364033 160 ntBASIC1.47□□□□□ -2.17
RORAP35398 RNU6-26P-201ENST00000383985 107 ntBASIC1.47□□□□□ -2.17
RORAP35398 MIR517C-201ENST00000385103 95 ntBASIC1.47□□□□□ -2.17
RORAP35398 SNORA48.1-201ENST00000390879 135 ntBASIC1.47□□□□□ -2.17
RORAP35398 SNORA12.2-201ENST00000391040 156 ntBASIC1.47□□□□□ -2.17
RORAP35398 RNA5SP100-201ENST00000410903 110 ntBASIC1.47□□□□□ -2.17
RORAP35398 RNA5SP59-201ENST00000410922 110 ntBASIC1.47□□□□□ -2.17
RORAP35398 VN1R108P-201ENST00000431580 830 ntBASIC1.47□□□□□ -2.17
RORAP35398 AL606489.2-201ENST00000433886 234 ntBASIC1.47□□□□□ -2.17
RORAP35398 AC002486.1-201ENST00000435098 391 ntBASIC1.47□□□□□ -2.17
RORAP35398 MTCO2P18-201ENST00000457151 658 ntBASIC1.47□□□□□ -2.17
RORAP35398 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.47□□□□□ -2.17
RORAP35398 AC007547.1-201ENST00000462177 490 ntBASIC1.47□□□□□ -2.17
RORAP35398 AC021146.2-201ENST00000504736 556 ntBASIC1.47□□□□□ -2.17
RORAP35398 HMGB1P29-201ENST00000505659 499 ntBASIC1.47□□□□□ -2.17
RORAP35398 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.47□□□□□ -2.17
RORAP35398 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.47□□□□□ -2.17
RORAP35398 AC005741.1-201ENST00000511094 432 ntBASIC1.47□□□□□ -2.17
RORAP35398 SNORA40.12-201ENST00000516329 111 ntBASIC1.47□□□□□ -2.17
RORAP35398 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.47□□□□□ -2.17
RORAP35398 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.47□□□□□ -2.17
RORAP35398 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.47□□□□□ -2.17
RORAP35398 AL118558.2-201ENST00000556294 238 ntBASIC1.47□□□□□ -2.17
RORAP35398 SUB1P3-201ENST00000564581 315 ntBASIC1.47□□□□□ -2.17
RORAP35398 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.47□□□□□ -2.17
RORAP35398 AL356157.2-201ENST00000605122 111 ntBASIC1.47□□□□□ -2.17
RORAP35398 U2.17-201ENST00000611454 95 ntBASIC1.47□□□□□ -2.17
RORAP35398 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.47□□□□□ -2.17
RORAP35398 PCGEM1.1-201ENST00000613431 131 ntBASIC1.47□□□□□ -2.17
RORAP35398 AL354950.2-201ENST00000617939 290 ntBASIC1.47□□□□□ -2.17
RORAP35398 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.47□□□□□ -2.17
RORAP35398 AC090582.1-201ENST00000636321 199 ntBASIC1.47□□□□□ -2.17
RORAP35398 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RORAP35398 MTND4P14-201ENST00000435799 1354 ntBASIC1.47□□□□□ -2.17
RORAP35398 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RORAP35398 AC092268.1-201ENST00000342691 405 ntBASIC1.46□□□□□ -2.18
RORAP35398 Y_RNA.1-201ENST00000352915 104 ntBASIC1.46□□□□□ -2.18
RORAP35398 Y_RNA.4-201ENST00000362333 112 ntBASIC1.46□□□□□ -2.18
RORAP35398 RNU6-338P-201ENST00000383888 105 ntBASIC1.46□□□□□ -2.18
RORAP35398 RNU6-378P-201ENST00000384324 107 ntBASIC1.46□□□□□ -2.18
RORAP35398 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.46□□□□□ -2.18
RORAP35398 SNORA67.6-201ENST00000391093 99 ntBASIC1.46□□□□□ -2.18
RORAP35398 MIR1323-201ENST00000408090 73 ntBASIC1.46□□□□□ -2.18
RORAP35398 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
RORAP35398 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.46□□□□□ -2.18
RORAP35398 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.46□□□□□ -2.18
RORAP35398 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.46□□□□□ -2.18
RORAP35398 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.46□□□□□ -2.18
RORAP35398 Z98751.3-201ENST00000604447 521 ntBASIC1.46□□□□□ -2.18
RORAP35398 AC007684.1-201ENST00000609671 477 ntBASIC1.46□□□□□ -2.18
RORAP35398 RMST_6.1-201ENST00000611980 203 ntBASIC1.46□□□□□ -2.18
RORAP35398 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
RORAP35398 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
RORAP35398 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
RORAP35398 LINC02555-201ENST00000563933 1951 ntBASIC1.45□□□□□ -2.18
RORAP35398 Y_RNA.67-201ENST00000362870 100 ntBASIC1.45□□□□□ -2.18
RORAP35398 Y_RNA.255-201ENST00000364581 97 ntBASIC1.45□□□□□ -2.18
RORAP35398 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.45□□□□□ -2.18
RORAP35398 RNA5SP219-201ENST00000390940 113 ntBASIC1.45□□□□□ -2.18
RORAP35398 RNU2-41P-201ENST00000410991 178 ntBASIC1.45□□□□□ -2.18
RORAP35398 AP000275.1-201ENST00000411943 390 ntBASIC1.45□□□□□ -2.18
RORAP35398 AL513185.2-201ENST00000425543 193 ntBASIC1.45□□□□□ -2.18
RORAP35398 MTATP6P17-201ENST00000431030 672 ntBASIC1.45□□□□□ -2.18
RORAP35398 RPS3AP17-201ENST00000472594 777 ntBASIC1.45□□□□□ -2.18
RORAP35398 AC016632.1-201ENST00000503994 196 ntBASIC1.45□□□□□ -2.18
RORAP35398 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.45□□□□□ -2.18
RORAP35398 RN7SKP298-201ENST00000515950 94 ntBASIC1.45□□□□□ -2.18
RORAP35398 SNORA14.1-201ENST00000516113 141 ntBASIC1.45□□□□□ -2.18
RORAP35398 Y_RNA.676-201ENST00000516393 96 ntBASIC1.45□□□□□ -2.18
RORAP35398 AP005597.4-201ENST00000526762 229 ntBASIC1.45□□□□□ -2.18
RORAP35398 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.45□□□□□ -2.18
RORAP35398 AC109446.1-201ENST00000566172 220 ntBASIC1.45□□□□□ -2.18
RORAP35398 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms