Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.7□□□□□ -2.14
RFC4P35249 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.7□□□□□ -2.14
RFC4P35249 TPT1P7-201ENST00000458300 517 ntBASIC1.7□□□□□ -2.14
RFC4P35249 GMFBP1-201ENST00000467831 427 ntBASIC1.7□□□□□ -2.14
RFC4P35249 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.7□□□□□ -2.14
RFC4P35249 MTCYBP18-201ENST00000501056 747 ntBASIC1.7□□□□□ -2.14
RFC4P35249 MTND2P33-201ENST00000506452 1031 ntBASIC1.7□□□□□ -2.14
RFC4P35249 PTP4A1P4-201ENST00000512479 322 ntBASIC1.7□□□□□ -2.14
RFC4P35249 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.7□□□□□ -2.14
RFC4P35249 RNA5SP480-201ENST00000516840 109 ntBASIC1.7□□□□□ -2.14
RFC4P35249 AL137161.1-201ENST00000532231 390 ntBASIC1.7□□□□□ -2.14
RFC4P35249 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.7□□□□□ -2.14
RFC4P35249 AC103996.1-201ENST00000555468 102 ntBASIC1.7□□□□□ -2.14
RFC4P35249 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.7□□□□□ -2.14
RFC4P35249 AC091805.2-201ENST00000603848 235 ntBASIC1.7□□□□□ -2.14
RFC4P35249 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RFC4P35249 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
RFC4P35249 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
RFC4P35249 RNU6-827P-201ENST00000365553 106 ntBASIC1.69□□□□□ -2.14
RFC4P35249 RNU6-517P-201ENST00000384362 110 ntBASIC1.69□□□□□ -2.14
RFC4P35249 Y_RNA.480-201ENST00000384364 102 ntBASIC1.69□□□□□ -2.14
RFC4P35249 MIR29B2-201ENST00000385055 81 ntBASIC1.69□□□□□ -2.14
RFC4P35249 MIR30A-201ENST00000385092 71 ntBASIC1.69□□□□□ -2.14
RFC4P35249 SRIP3-201ENST00000413200 219 ntBASIC1.69□□□□□ -2.14
RFC4P35249 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.69□□□□□ -2.14
RFC4P35249 USP9YP18-201ENST00000425912 695 ntBASIC1.69□□□□□ -2.14
RFC4P35249 RPS4XP11-201ENST00000446897 772 ntBASIC1.69□□□□□ -2.14
RFC4P35249 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.69□□□□□ -2.14
RFC4P35249 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.69□□□□□ -2.14
RFC4P35249 COX6CP14-201ENST00000469580 174 ntBASIC1.69□□□□□ -2.14
RFC4P35249 AC004223.1-201ENST00000479840 271 ntBASIC1.69□□□□□ -2.14
RFC4P35249 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.69□□□□□ -2.14
RFC4P35249 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.69□□□□□ -2.14
RFC4P35249 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.69□□□□□ -2.14
RFC4P35249 AC022616.8-201ENST00000533569 253 ntBASIC1.69□□□□□ -2.14
RFC4P35249 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.69□□□□□ -2.14
RFC4P35249 MTND1P15-201ENST00000579262 949 ntBASIC1.69□□□□□ -2.14
RFC4P35249 MIR3660-201ENST00000584845 100 ntBASIC1.69□□□□□ -2.14
RFC4P35249 AC022709.1-201ENST00000615967 87 ntBASIC1.69□□□□□ -2.14
RFC4P35249 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RFC4P35249 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RFC4P35249 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RFC4P35249 Y_RNA.1-201ENST00000352915 104 ntBASIC1.68□□□□□ -2.14
RFC4P35249 RNU1-58P-201ENST00000362413 163 ntBASIC1.68□□□□□ -2.14
RFC4P35249 RNU6-1285P-201ENST00000363480 105 ntBASIC1.68□□□□□ -2.14
RFC4P35249 SNORD116-9-201ENST00000384000 95 ntBASIC1.68□□□□□ -2.14
RFC4P35249 RNU6-203P-201ENST00000384038 104 ntBASIC1.68□□□□□ -2.14
RFC4P35249 RNU5A-6P-201ENST00000384136 116 ntBASIC1.68□□□□□ -2.14
RFC4P35249 SNORD116-3-201ENST00000384287 95 ntBASIC1.68□□□□□ -2.14
RFC4P35249 RNU6-43P-201ENST00000384302 107 ntBASIC1.68□□□□□ -2.14
RFC4P35249 SNORD116-7-201ENST00000384404 95 ntBASIC1.68□□□□□ -2.14
RFC4P35249 SNORD116-5-201ENST00000384462 95 ntBASIC1.68□□□□□ -2.14
RFC4P35249 MIR320A-201ENST00000385302 82 ntBASIC1.68□□□□□ -2.14
RFC4P35249 SNORA40.6-201ENST00000391153 128 ntBASIC1.68□□□□□ -2.14
RFC4P35249 SNORA12-201ENST00000391162 147 ntBASIC1.68□□□□□ -2.14
RFC4P35249 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.68□□□□□ -2.14
RFC4P35249 AC009310.1-201ENST00000414414 451 ntBASIC1.68□□□□□ -2.14
RFC4P35249 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.68□□□□□ -2.14
RFC4P35249 AL606489.2-201ENST00000433886 234 ntBASIC1.68□□□□□ -2.14
RFC4P35249 AC073415.1-201ENST00000449240 153 ntBASIC1.68□□□□□ -2.14
RFC4P35249 RPL31P3-201ENST00000458430 332 ntBASIC1.68□□□□□ -2.14
RFC4P35249 RNU7-180P-201ENST00000459240 63 ntBASIC1.68□□□□□ -2.14
RFC4P35249 MIR449C-201ENST00000516047 92 ntBASIC1.68□□□□□ -2.14
RFC4P35249 RN7SKP256-201ENST00000517201 314 ntBASIC1.68□□□□□ -2.14
RFC4P35249 AC109479.2-201ENST00000517842 174 ntBASIC1.68□□□□□ -2.14
RFC4P35249 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.68□□□□□ -2.14
RFC4P35249 AP003033.1-201ENST00000527244 415 ntBASIC1.68□□□□□ -2.14
RFC4P35249 AC016957.1-201ENST00000534895 309 ntBASIC1.68□□□□□ -2.14
RFC4P35249 MTCO3P23-201ENST00000561363 289 ntBASIC1.68□□□□□ -2.14
RFC4P35249 MIR3611-201ENST00000584484 83 ntBASIC1.68□□□□□ -2.14
RFC4P35249 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.68□□□□□ -2.14
RFC4P35249 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.68□□□□□ -2.14
RFC4P35249 MIR1248-201ENST00000629190 106 ntBASIC1.68□□□□□ -2.14
RFC4P35249 RNU4-15P-201ENST00000362613 141 ntBASIC1.67□□□□□ -2.14
RFC4P35249 Y_RNA.409-201ENST00000383990 98 ntBASIC1.67□□□□□ -2.14
RFC4P35249 RNU6-1103P-201ENST00000384150 107 ntBASIC1.67□□□□□ -2.14
RFC4P35249 MIR597-201ENST00000384968 97 ntBASIC1.67□□□□□ -2.14
RFC4P35249 BTF3L4P2-201ENST00000392798 346 ntBASIC1.67□□□□□ -2.14
RFC4P35249 AC010975.2-201ENST00000427781 588 ntBASIC1.67□□□□□ -2.14
RFC4P35249 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.67□□□□□ -2.14
RFC4P35249 RNU7-167P-201ENST00000459160 62 ntBASIC1.67□□□□□ -2.14
RFC4P35249 CCDC34P1-201ENST00000507441 517 ntBASIC1.67□□□□□ -2.14
RFC4P35249 AK3P2-201ENST00000507976 429 ntBASIC1.67□□□□□ -2.14
RFC4P35249 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.67□□□□□ -2.14
RFC4P35249 MTND3P5-201ENST00000512798 333 ntBASIC1.67□□□□□ -2.14
RFC4P35249 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.67□□□□□ -2.14
RFC4P35249 AC004223.2-201ENST00000590309 544 ntBASIC1.67□□□□□ -2.14
RFC4P35249 RNU6-85P-201ENST00000605989 107 ntBASIC1.67□□□□□ -2.14
RFC4P35249 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.67□□□□□ -2.14
RFC4P35249 AC005609.4-201ENST00000625071 447 ntBASIC1.67□□□□□ -2.14
RFC4P35249 SNORD114-27-201ENST00000363766 70 ntBASIC1.66□□□□□ -2.14
RFC4P35249 Y_RNA.399-201ENST00000383955 105 ntBASIC1.66□□□□□ -2.14
RFC4P35249 SNORD116-1-201ENST00000384335 95 ntBASIC1.66□□□□□ -2.14
RFC4P35249 MIR520E-201ENST00000384867 87 ntBASIC1.66□□□□□ -2.14
RFC4P35249 RNU4-55P-201ENST00000410731 137 ntBASIC1.66□□□□□ -2.14
RFC4P35249 RNA5SP501-201ENST00000410990 112 ntBASIC1.66□□□□□ -2.14
RFC4P35249 AL117339.3-201ENST00000418733 162 ntBASIC1.66□□□□□ -2.14
RFC4P35249 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.66□□□□□ -2.14
RFC4P35249 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.66□□□□□ -2.14
RFC4P35249 AL121601.2-201ENST00000438019 707 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms