Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXA9P31269 CYCSP27-201ENST00000527643 293 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.62□□□□□ -2.15
HOXA9P31269 AC016957.1-201ENST00000534895 309 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 AL161670.1-201ENST00000554348 137 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 MIR4285-201ENST00000581001 85 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.62□□□□□ -2.15
HOXA9P31269 RNU1-23P-201ENST00000363361 144 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 RNU6-1285P-201ENST00000363480 105 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 RNU6-1090P-201ENST00000364065 94 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 Y_RNA.516-201ENST00000384541 124 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 SNORD73A-201ENST00000386062 65 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HOXA9P31269 CBX3P9-201ENST00000402326 552 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 AL590002.1-201ENST00000406554 418 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 RNU6-174P-201ENST00000410406 106 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXA9P31269 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.61□□□□□ -2.15
HOXA9P31269 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXA9P31269 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.61□□□□□ -2.15
HOXA9P31269 AL031274.1-201ENST00000450334 232 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXA9P31269 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXA9P31269 RPL30P1-201ENST00000488676 339 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 RNU6-189P-201ENST00000516120 101 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 RNU6-1281P-201ENST00000516223 105 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 RNU6-970P-201ENST00000516312 107 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 RNU6-1069P-201ENST00000516612 133 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXA9P31269 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.61□□□□□ -2.15
HOXA9P31269 IMMP1LP2-201ENST00000552954 492 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.61□□□□□ -2.15
HOXA9P31269 AC233702.2-202ENST00000562547 291 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 TPRKBP2-201ENST00000565969 475 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.61□□□□□ -2.15
HOXA9P31269 MIR3941-201ENST00000582572 103 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 AC092747.3-201ENST00000603769 301 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 RNU6-89P-201ENST00000606519 100 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 Z82243.1-201ENST00000609432 473 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
HOXA9P31269 MIR1321-201ENST00000637766 79 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
HOXA9P31269 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.61□□□□□ -2.15
HOXA9P31269 RNU6-212P-201ENST00000362642 104 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 RNU6-655P-201ENST00000362858 107 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 RNU6-1210P-201ENST00000363775 107 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 RNU4-13P-201ENST00000364019 141 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 RNU6-522P-201ENST00000364497 107 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 Y_RNA.327-201ENST00000365201 102 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HOXA9P31269 MTND3P21-201ENST00000433774 331 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.6□□□□□ -2.15
HOXA9P31269 IFNA20P-201ENST00000436840 528 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.6□□□□□ -2.15
HOXA9P31269 RNU6-1208P-201ENST00000459588 107 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.6□□□□□ -2.15
HOXA9P31269 AC091885.1-201ENST00000506658 268 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 RNU5F-2P-201ENST00000516066 82 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.6□□□□□ -2.15
HOXA9P31269 MIR4713-201ENST00000582691 75 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 MIR5692C1-201ENST00000585309 91 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AC010928.2-201ENST00000588017 287 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.6□□□□□ -2.15
HOXA9P31269 AC010525.2-201ENST00000590920 195 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AL162413.1-201ENST00000603198 110 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AC092807.2-201ENST00000609367 243 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AL121757.2-201ENST00000611223 313 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AC007792.1-201ENST00000623023 402 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 AC068137.3-201ENST00000639191 341 ntBASIC1.6□□□□□ -2.15
HOXA9P31269 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HOXA9P31269 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
HOXA9P31269 RNU6-451P-201ENST00000362921 107 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 SNORD32A-201ENST00000364805 84 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 RNU6-43P-201ENST00000384302 107 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 RNU6-1274P-201ENST00000384557 107 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 RNU6-1222P-201ENST00000384615 107 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 MIR934-201ENST00000401241 83 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 RNU2-48P-201ENST00000410694 191 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.59□□□□□ -2.15
HOXA9P31269 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.59□□□□□ -2.15
HOXA9P31269 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.59□□□□□ -2.15
HOXA9P31269 RNU7-138P-201ENST00000459479 64 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 Y_RNA.654-201ENST00000497848 106 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 AC079140.5-201ENST00000507882 310 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 AC069113.1-201ENST00000517763 267 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 AP005597.4-201ENST00000526762 229 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.59□□□□□ -2.15
HOXA9P31269 AL157687.1-201ENST00000554853 619 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.59□□□□□ -2.15
HOXA9P31269 AC015720.1-201ENST00000565251 277 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 MIR4421-201ENST00000578133 69 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 AC091135.1-201ENST00000585943 307 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 BNIP3P16-201ENST00000589779 534 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 AC064836.2-201ENST00000609491 462 ntBASIC1.59□□□□□ -2.15
HOXA9P31269 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.59□□□□□ -2.15
HOXA9P31269 FER-210ENST00000628534 558 ntTSL 5 BASIC1.59□□□□□ -2.15
HOXA9P31269 OR4G1P-203ENST00000641984 1631 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms