Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RNU2-34P-201ENST00000516534 121 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 RNU1-107P-201ENST00000516617 154 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 DEFB131D-201ENST00000526803 184 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 AC004223.2-201ENST00000590309 544 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 AC012507.3-201ENST00000603556 477 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 RPL17P51-201ENST00000605218 238 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 MIR15A-201ENST00000607334 83 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 AC124016.2-201ENST00000610058 665 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 AC106754.2-201ENST00000623006 233 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 AC010487.4-201ENST00000637027 61 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 AC099654.8-201ENST00000637757 681 ntBASIC-0.18□□□□□ -2.44
HIST1H1DP16402 MIR16-2-201ENST00000362117 81 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 RNU1-76P-201ENST00000362903 159 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 RNU6-883P-201ENST00000384597 107 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 RNA5SP201-201ENST00000410316 124 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.19□□□□□ -2.44
HIST1H1DP16402 MTCO3P9-201ENST00000506989 781 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 RNA5SP227-201ENST00000516184 113 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 SNORA31.10-201ENST00000516482 106 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 MTND2P7-201ENST00000521337 640 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.19□□□□□ -2.44
HIST1H1DP16402 AC027419.1-201ENST00000522976 328 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 MIR4290-201ENST00000583807 95 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 AC110760.3-201ENST00000598794 467 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 AC064872.1-201ENST00000604823 1072 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 AL391903.3-201ENST00000612158 163 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.19□□□□□ -2.44
HIST1H1DP16402 AC073349.3-201ENST00000617616 186 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 SNORD98-201ENST00000636377 67 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 MIR371B-201ENST00000638082 66 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 BX322639.1-202ENST00000423987 2213 ntBASIC-0.19□□□□□ -2.44
HIST1H1DP16402 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 SNORA33-201ENST00000363664 130 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 RNU6-877P-201ENST00000383868 107 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 RNU6-815P-201ENST00000384080 113 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 MIR660-201ENST00000385235 97 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 RNU6-278P-201ENST00000390945 109 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 RNA5SP109-201ENST00000391010 116 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 RN7SKP200-201ENST00000410564 320 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.2□□□□□ -2.44
HIST1H1DP16402 RPL31P35-201ENST00000431058 377 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.2□□□□□ -2.44
HIST1H1DP16402 AL133217.1-201ENST00000450980 425 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 AC119751.4-201ENST00000507498 357 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.2□□□□□ -2.44
HIST1H1DP16402 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.2□□□□□ -2.44
HIST1H1DP16402 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.2□□□□□ -2.44
HIST1H1DP16402 AC109446.1-201ENST00000566172 220 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.2□□□□□ -2.44
HIST1H1DP16402 AC131055.1-201ENST00000584626 316 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 RMST_7.1-201ENST00000621935 268 ntBASIC-0.2□□□□□ -2.44
HIST1H1DP16402 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 SMIM11P1-201ENST00000369586 178 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.21□□□□□ -2.44
HIST1H1DP16402 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AC104332.1-201ENST00000440471 797 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 MTCO1P19-201ENST00000443487 500 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AC092989.1-201ENST00000481235 277 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 HMGB1P29-201ENST00000505659 499 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AC112206.3-201ENST00000514578 389 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.21□□□□□ -2.44
HIST1H1DP16402 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AL354696.1-201ENST00000614652 497 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AC023158.2-201ENST00000614876 543 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.21□□□□□ -2.44
HIST1H1DP16402 RMST_2.1-201ENST00000617263 136 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AC131159.1-201ENST00000621854 213 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AC024940.5-201ENST00000622889 474 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 AL603839.4-201ENST00000624658 1005 ntBASIC-0.21□□□□□ -2.44
HIST1H1DP16402 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
HIST1H1DP16402 RNU6-199P-201ENST00000362954 107 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 RNA5SP214-201ENST00000363378 118 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 RNY1P14-201ENST00000384426 108 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 MIR544A-201ENST00000384855 91 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 RNU4-22P-201ENST00000411058 166 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AC010154.1-201ENST00000425857 269 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AP000542.1-201ENST00000448473 371 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AC093899.1-201ENST00000457984 376 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AC007547.1-201ENST00000462177 490 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AC109445.1-201ENST00000512356 383 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AC069113.3-201ENST00000521019 150 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AC109810.1-201ENST00000534066 224 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.22□□□□□ -2.44
HIST1H1DP16402 ZNF92P2-201ENST00000600543 1059 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AL606834.3-201ENST00000602615 496 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 AC104073.3-201ENST00000610942 955 ntBASIC-0.22□□□□□ -2.44
HIST1H1DP16402 RNU6-289P-201ENST00000364093 107 ntBASIC-0.23□□□□□ -2.45
HIST1H1DP16402 RNU6-650P-201ENST00000365658 111 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms