Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 HIGD1AP6-201ENST00000521833 279 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.14□□□□□ -2.43
COL6A3P12111 TRAV32-201ENST00000553993 340 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AL353997.4-201ENST00000586196 166 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AC005261.5-201ENST00000596280 355 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AP002906.1-201ENST00000603405 233 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 HMGB1P51-201ENST00000605166 638 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AC107952.2-201ENST00000606048 486 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AC064807.4-201ENST00000607201 407 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 RNU6-343P-201ENST00000364709 104 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 MIR181B2-201ENST00000385004 89 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AL109755.1-201ENST00000401791 649 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 MTND1P28-201ENST00000435623 950 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 MTCO3P10-201ENST00000455912 772 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 RPS3AP17-201ENST00000472594 777 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
COL6A3P12111 AC010460.2-201ENST00000509054 677 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 RNU6-586P-201ENST00000517265 104 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL6A3P12111 AP002004.2-201ENST00000531656 154 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AC016542.1-201ENST00000608259 493 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AC027449.1-201ENST00000608890 407 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.14□□□□□ -2.43
COL6A3P12111 SEPT14P17-201ENST00000617978 177 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AL603758.1-201ENST00000618654 241 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AC068205.3-201ENST00000636385 468 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
COL6A3P12111 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
COL6A3P12111 RN7SKP266-201ENST00000410232 287 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 ARL5AP1-201ENST00000418991 388 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 MTCO2P34-201ENST00000421994 607 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 HLA-S-202ENST00000425174 53 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 DEFB130D-201ENST00000426866 237 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL6A3P12111 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL6A3P12111 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 RPL32P14-201ENST00000463196 378 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 RNU6-678P-201ENST00000516832 109 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL6A3P12111 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.14□□□□□ -2.43
COL6A3P12111 AC120349.3-201ENST00000624377 529 ntBASIC-0.14□□□□□ -2.43
COL6A3P12111 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 RNU6-921P-201ENST00000384361 107 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 ELOCP9-201ENST00000418624 239 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 FO393419.3-201ENST00000428741 282 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 GPM6BP2-201ENST00000432046 144 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AC002429.1-201ENST00000437672 148 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 GPM6BP1-201ENST00000446387 144 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 RPL7P55-201ENST00000450522 746 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 OR6C5P-201ENST00000452388 923 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 RNU7-159P-201ENST00000459284 62 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 RNU6-922P-201ENST00000516753 99 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AC022861.1-201ENST00000522981 663 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.15□□□□□ -2.43
COL6A3P12111 NAMPTP3-201ENST00000569273 224 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 VN1R83P-201ENST00000595685 445 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 RNU6-87P-201ENST00000607561 108 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AC135803.1-201ENST00000608748 565 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AL590491.3-201ENST00000610731 82 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AL157786.1-207ENST00000627771 695 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 MIR610-201ENST00000385139 96 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AC016909.1-201ENST00000415916 166 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL6A3P12111 AC243964.1-201ENST00000441814 261 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 MTND2P4-201ENST00000445034 1004 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AC091860.1-201ENST00000505723 432 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AC093259.1-201ENST00000509755 300 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 RNU6-947P-201ENST00000516264 106 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.15□□□□□ -2.43
COL6A3P12111 AC004217.3-201ENST00000551552 878 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AL132657.2-201ENST00000564417 358 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 MIR4709-201ENST00000577272 72 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 AC009032.1-201ENST00000617574 431 ntBASIC-0.15□□□□□ -2.43
COL6A3P12111 RNU6-296P-201ENST00000384608 107 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 MIR145-201ENST00000384967 88 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 MIR525-201ENST00000384978 85 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 RNA5SP111-201ENST00000411386 101 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.16□□□□□ -2.43
COL6A3P12111 TXNL1P1-201ENST00000429528 554 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 RPL23AP50-201ENST00000434149 455 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 FABP5P4-201ENST00000437203 171 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 AC005094.1-201ENST00000440420 368 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 AL353752.1-201ENST00000454946 260 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 AC009646.1-201ENST00000510455 318 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 AC018630.3-201ENST00000542637 96 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 AC138869.1-201ENST00000568623 124 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 RPL23AP91-201ENST00000569211 455 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 MIR3139-201ENST00000579145 76 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 AL353765.1-201ENST00000605514 183 ntBASIC-0.16□□□□□ -2.43
COL6A3P12111 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-0.16□□□□□ -2.43
COL6A3P12111 AC092268.1-201ENST00000342691 405 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 SUGT1P1-201ENST00000379514 476 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 SNORD116-13-201ENST00000384408 92 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.16□□□□□ -2.44
COL6A3P12111 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.16□□□□□ -2.44
COL6A3P12111 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms