Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.5□□□□□ -2.01
PCNAP12004 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PCNAP12004 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
PCNAP12004 ZNF299P-201ENST00000406845 1804 ntBASIC2.5□□□□□ -2.01
PCNAP12004 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PCNAP12004 RNU6-859P-201ENST00000362728 107 ntBASIC2.5□□□□□ -2.01
PCNAP12004 Y_RNA.315-201ENST00000365117 102 ntBASIC2.5□□□□□ -2.01
PCNAP12004 RNU6-142P-201ENST00000384019 107 ntBASIC2.5□□□□□ -2.01
PCNAP12004 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PCNAP12004 SNORA12-201ENST00000391162 147 ntBASIC2.5□□□□□ -2.01
PCNAP12004 SNORA75.6-201ENST00000391318 127 ntBASIC2.5□□□□□ -2.01
PCNAP12004 RNA5SP494-201ENST00000410653 129 ntBASIC2.5□□□□□ -2.01
PCNAP12004 RNU2-52P-201ENST00000410680 190 ntBASIC2.5□□□□□ -2.01
PCNAP12004 ARL5AP4-201ENST00000430731 512 ntBASIC2.5□□□□□ -2.01
PCNAP12004 AC011816.1-201ENST00000441346 546 ntBASIC2.5□□□□□ -2.01
PCNAP12004 ELOCP24-201ENST00000456370 334 ntBASIC2.5□□□□□ -2.01
PCNAP12004 AC087477.1-201ENST00000465747 340 ntBASIC2.5□□□□□ -2.01
PCNAP12004 RPL30P10-201ENST00000488148 337 ntBASIC2.5□□□□□ -2.01
PCNAP12004 AC090096.1-201ENST00000489168 390 ntBASIC2.5□□□□□ -2.01
PCNAP12004 SRIP1-201ENST00000489235 288 ntBASIC2.5□□□□□ -2.01
PCNAP12004 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.5□□□□□ -2.01
PCNAP12004 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.5□□□□□ -2.01
PCNAP12004 AC096725.1-201ENST00000514266 313 ntBASIC2.5□□□□□ -2.01
PCNAP12004 AC093303.1-201ENST00000514549 295 ntBASIC2.5□□□□□ -2.01
PCNAP12004 AC027176.1-201ENST00000560204 514 ntBASIC2.5□□□□□ -2.01
PCNAP12004 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.5□□□□□ -2.01
PCNAP12004 AC080078.3-201ENST00000605407 463 ntBASIC2.5□□□□□ -2.01
PCNAP12004 MIR7106-201ENST00000612419 65 ntBASIC2.5□□□□□ -2.01
PCNAP12004 MIR6895-201ENST00000613497 78 ntBASIC2.5□□□□□ -2.01
PCNAP12004 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.5□□□□□ -2.01
PCNAP12004 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.5□□□□□ -2.01
PCNAP12004 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.5□□□□□ -2.01
PCNAP12004 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.49□□□□□ -2.01
PCNAP12004 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCNAP12004 RNU6-595P-201ENST00000363944 107 ntBASIC2.49□□□□□ -2.01
PCNAP12004 Y_RNA.813-201ENST00000364639 102 ntBASIC2.49□□□□□ -2.01
PCNAP12004 SNORA6-201ENST00000384033 151 ntBASIC2.49□□□□□ -2.01
PCNAP12004 RNU6-1274P-201ENST00000384557 107 ntBASIC2.49□□□□□ -2.01
PCNAP12004 MIR549A-201ENST00000385268 96 ntBASIC2.49□□□□□ -2.01
PCNAP12004 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.49□□□□□ -2.01
PCNAP12004 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.49□□□□□ -2.01
PCNAP12004 RNU7-152P-201ENST00000458982 64 ntBASIC2.49□□□□□ -2.01
PCNAP12004 AC027575.1-201ENST00000481064 460 ntBASIC2.49□□□□□ -2.01
PCNAP12004 AC145146.1-201ENST00000496370 254 ntBASIC2.49□□□□□ -2.01
PCNAP12004 AC022493.2-201ENST00000506122 481 ntBASIC2.49□□□□□ -2.01
PCNAP12004 HMGB3P3-201ENST00000510526 400 ntBASIC2.49□□□□□ -2.01
PCNAP12004 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.49□□□□□ -2.01
PCNAP12004 AC021231.3-201ENST00000558497 370 ntBASIC2.49□□□□□ -2.01
PCNAP12004 AC023824.2-201ENST00000566185 400 ntBASIC2.49□□□□□ -2.01
PCNAP12004 MIR3136-201ENST00000583498 78 ntBASIC2.49□□□□□ -2.01
PCNAP12004 AL670379.2-201ENST00000604983 252 ntBASIC2.49□□□□□ -2.01
PCNAP12004 AC090574.1-201ENST00000623186 233 ntBASIC2.49□□□□□ -2.01
PCNAP12004 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.49□□□□□ -2.01
PCNAP12004 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PCNAP12004 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
PCNAP12004 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PCNAP12004 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
PCNAP12004 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.48□□□□□ -2.01
PCNAP12004 RNY1P16-201ENST00000363063 111 ntBASIC2.48□□□□□ -2.01
PCNAP12004 RNU6-944P-201ENST00000364023 107 ntBASIC2.48□□□□□ -2.01
PCNAP12004 RNA5SP125-201ENST00000364843 120 ntBASIC2.48□□□□□ -2.01
PCNAP12004 RNU6-378P-201ENST00000384324 107 ntBASIC2.48□□□□□ -2.01
PCNAP12004 MIR144-201ENST00000384886 86 ntBASIC2.48□□□□□ -2.01
PCNAP12004 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.48□□□□□ -2.01
PCNAP12004 AC012306.1-201ENST00000423267 114 ntBASIC2.48□□□□□ -2.01
PCNAP12004 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.48□□□□□ -2.01
PCNAP12004 RNU7-26P-201ENST00000458980 63 ntBASIC2.48□□□□□ -2.01
PCNAP12004 AC080013.2-201ENST00000460866 323 ntBASIC2.48□□□□□ -2.01
PCNAP12004 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.48□□□□□ -2.01
PCNAP12004 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.48□□□□□ -2.01
PCNAP12004 CBX3P7-201ENST00000532876 502 ntBASIC2.48□□□□□ -2.01
PCNAP12004 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.48□□□□□ -2.01
PCNAP12004 MIR4658-201ENST00000584344 65 ntBASIC2.48□□□□□ -2.01
PCNAP12004 AL160413.1-201ENST00000622780 310 ntBASIC2.48□□□□□ -2.01
PCNAP12004 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
PCNAP12004 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCNAP12004 AC073544.1-201ENST00000600110 1595 ntBASIC2.48□□□□□ -2.01
PCNAP12004 MIR369-201ENST00000362155 70 ntBASIC2.47□□□□□ -2.01
PCNAP12004 Y_RNA.187-201ENST00000363918 113 ntBASIC2.47□□□□□ -2.01
PCNAP12004 Y_RNA.460-201ENST00000384255 102 ntBASIC2.47□□□□□ -2.01
PCNAP12004 MIR32-201ENST00000384965 70 ntBASIC2.47□□□□□ -2.01
PCNAP12004 MIR559-201ENST00000385188 96 ntBASIC2.47□□□□□ -2.01
PCNAP12004 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PCNAP12004 MIR208B-201ENST00000401172 77 ntBASIC2.47□□□□□ -2.01
PCNAP12004 HMGB3P2-201ENST00000411913 584 ntBASIC2.47□□□□□ -2.01
PCNAP12004 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.47□□□□□ -2.01
PCNAP12004 AL445305.1-201ENST00000432577 575 ntBASIC2.47□□□□□ -2.01
PCNAP12004 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.47□□□□□ -2.01
PCNAP12004 RPS3P1-201ENST00000456781 192 ntBASIC2.47□□□□□ -2.01
PCNAP12004 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.47□□□□□ -2.01
PCNAP12004 TOMM22P6-201ENST00000465035 409 ntBASIC2.47□□□□□ -2.01
PCNAP12004 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.47□□□□□ -2.01
PCNAP12004 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.47□□□□□ -2.01
PCNAP12004 HMGN1P13-201ENST00000505795 138 ntBASIC2.47□□□□□ -2.01
PCNAP12004 RNU6-470P-201ENST00000515954 104 ntBASIC2.47□□□□□ -2.01
PCNAP12004 RNU6-1153P-201ENST00000516760 105 ntBASIC2.47□□□□□ -2.01
PCNAP12004 EIF4BP1-201ENST00000554881 351 ntBASIC2.47□□□□□ -2.01
PCNAP12004 AL138963.2-201ENST00000605137 226 ntBASIC2.47□□□□□ -2.01
PCNAP12004 AL033523.1-201ENST00000605153 153 ntBASIC2.47□□□□□ -2.01
PCNAP12004 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms