Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 RNA5SP201-201ENST00000410316 124 ntBASIC1.2□□□□□ -2.22
THRAP10827 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.2□□□□□ -2.22
THRAP10827 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.2□□□□□ -2.22
THRAP10827 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
THRAP10827 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.2□□□□□ -2.22
THRAP10827 AC022364.2-201ENST00000457963 554 ntBASIC1.2□□□□□ -2.22
THRAP10827 GMFBP1-201ENST00000467831 427 ntBASIC1.2□□□□□ -2.22
THRAP10827 AC079382.1-201ENST00000493346 557 ntBASIC1.2□□□□□ -2.22
THRAP10827 AC097473.1-201ENST00000508142 408 ntBASIC1.2□□□□□ -2.22
THRAP10827 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.2□□□□□ -2.22
THRAP10827 SNORA31.16-201ENST00000516773 139 ntBASIC1.2□□□□□ -2.22
THRAP10827 Y_RNA.717-201ENST00000517106 92 ntBASIC1.2□□□□□ -2.22
THRAP10827 SUMO2P18-201ENST00000518873 252 ntBASIC1.2□□□□□ -2.22
THRAP10827 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.2□□□□□ -2.22
THRAP10827 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.2□□□□□ -2.22
THRAP10827 MIR5094-201ENST00000578766 85 ntBASIC1.2□□□□□ -2.22
THRAP10827 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
THRAP10827 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
THRAP10827 AC027514.1-201ENST00000588561 1603 ntBASIC1.19□□□□□ -2.22
THRAP10827 Y_RNA.269-201ENST00000364685 89 ntBASIC1.19□□□□□ -2.22
THRAP10827 RNU4-48P-201ENST00000365559 182 ntBASIC1.19□□□□□ -2.22
THRAP10827 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.19□□□□□ -2.22
THRAP10827 Y_RNA.508-201ENST00000384502 114 ntBASIC1.19□□□□□ -2.22
THRAP10827 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
THRAP10827 MIR1267-201ENST00000408723 78 ntBASIC1.19□□□□□ -2.22
THRAP10827 AC139712.2-201ENST00000424302 339 ntBASIC1.19□□□□□ -2.22
THRAP10827 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.19□□□□□ -2.22
THRAP10827 RPL23AP95-201ENST00000426806 265 ntBASIC1.19□□□□□ -2.22
THRAP10827 AL133396.1-201ENST00000432048 687 ntBASIC1.19□□□□□ -2.22
THRAP10827 SNRPEP8-201ENST00000442866 260 ntBASIC1.19□□□□□ -2.22
THRAP10827 RPS29P15-201ENST00000458329 171 ntBASIC1.19□□□□□ -2.22
THRAP10827 RNA5SP269-201ENST00000459032 137 ntBASIC1.19□□□□□ -2.22
THRAP10827 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.19□□□□□ -2.22
THRAP10827 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.19□□□□□ -2.22
THRAP10827 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.19□□□□□ -2.22
THRAP10827 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.19□□□□□ -2.22
THRAP10827 RNU2-69P-201ENST00000516061 100 ntBASIC1.19□□□□□ -2.22
THRAP10827 RNU6-567P-201ENST00000516746 107 ntBASIC1.19□□□□□ -2.22
THRAP10827 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.19□□□□□ -2.22
THRAP10827 LRRC34P1-201ENST00000542742 915 ntBASIC1.19□□□□□ -2.22
THRAP10827 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.19□□□□□ -2.22
THRAP10827 RRN3P3-201ENST00000549207 578 ntBASIC1.19□□□□□ -2.22
THRAP10827 AGGF1P4-201ENST00000568249 801 ntBASIC1.19□□□□□ -2.22
THRAP10827 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.19□□□□□ -2.22
THRAP10827 MIR3941-201ENST00000582572 103 ntBASIC1.19□□□□□ -2.22
THRAP10827 AC245014.2-201ENST00000603689 287 ntBASIC1.19□□□□□ -2.22
THRAP10827 Z94722.1-201ENST00000604328 474 ntBASIC1.19□□□□□ -2.22
THRAP10827 AC246785.4-201ENST00000605374 287 ntBASIC1.19□□□□□ -2.22
THRAP10827 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.19□□□□□ -2.22
THRAP10827 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.19□□□□□ -2.22
THRAP10827 MTND4P14-201ENST00000435799 1354 ntBASIC1.19□□□□□ -2.22
THRAP10827 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
THRAP10827 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
THRAP10827 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
THRAP10827 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
THRAP10827 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
THRAP10827 FGF7P2-201ENST00000332473 296 ntBASIC1.18□□□□□ -2.22
THRAP10827 Y_RNA.191-201ENST00000363972 113 ntBASIC1.18□□□□□ -2.22
THRAP10827 RNU4-91P-201ENST00000364778 135 ntBASIC1.18□□□□□ -2.22
THRAP10827 SNORA32.2-201ENST00000384049 122 ntBASIC1.18□□□□□ -2.22
THRAP10827 RNU6-296P-201ENST00000384608 107 ntBASIC1.18□□□□□ -2.22
THRAP10827 MIR518E-201ENST00000385252 88 ntBASIC1.18□□□□□ -2.22
THRAP10827 RPL21P111-201ENST00000418453 477 ntBASIC1.18□□□□□ -2.22
THRAP10827 AL117339.3-201ENST00000418733 162 ntBASIC1.18□□□□□ -2.22
THRAP10827 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.18□□□□□ -2.22
THRAP10827 SNAP23P1-201ENST00000433229 246 ntBASIC1.18□□□□□ -2.22
THRAP10827 UBE2V1P8-201ENST00000437166 265 ntBASIC1.18□□□□□ -2.22
THRAP10827 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.18□□□□□ -2.22
THRAP10827 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.18□□□□□ -2.22
THRAP10827 AC245517.4-201ENST00000448601 281 ntBASIC1.18□□□□□ -2.22
THRAP10827 RPS27AP8-201ENST00000452665 445 ntBASIC1.18□□□□□ -2.22
THRAP10827 AC016632.1-201ENST00000503994 196 ntBASIC1.18□□□□□ -2.22
THRAP10827 SNORD60.2-201ENST00000516883 86 ntBASIC1.18□□□□□ -2.22
THRAP10827 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.18□□□□□ -2.22
THRAP10827 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.18□□□□□ -2.22
THRAP10827 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.18□□□□□ -2.22
THRAP10827 AP003034.1-201ENST00000534621 422 ntBASIC1.18□□□□□ -2.22
THRAP10827 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.18□□□□□ -2.22
THRAP10827 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.18□□□□□ -2.22
THRAP10827 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.18□□□□□ -2.22
THRAP10827 MIR4703-201ENST00000577728 79 ntBASIC1.18□□□□□ -2.22
THRAP10827 MIR3913-1-201ENST00000577744 102 ntBASIC1.18□□□□□ -2.22
THRAP10827 RPL17P51-201ENST00000605218 238 ntBASIC1.18□□□□□ -2.22
THRAP10827 AC080078.3-201ENST00000605407 463 ntBASIC1.18□□□□□ -2.22
THRAP10827 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.18□□□□□ -2.22
THRAP10827 RNU6-181P-201ENST00000363225 107 ntBASIC1.17□□□□□ -2.22
THRAP10827 Y_RNA.159-201ENST00000363674 87 ntBASIC1.17□□□□□ -2.22
THRAP10827 Y_RNA.796-201ENST00000364268 102 ntBASIC1.17□□□□□ -2.22
THRAP10827 Y_RNA.799-201ENST00000364992 102 ntBASIC1.17□□□□□ -2.22
THRAP10827 Y_RNA.355-201ENST00000365462 98 ntBASIC1.17□□□□□ -2.22
THRAP10827 SNORD70.1-201ENST00000391007 85 ntBASIC1.17□□□□□ -2.22
THRAP10827 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.17□□□□□ -2.22
THRAP10827 BX295541.1-201ENST00000417774 250 ntBASIC1.17□□□□□ -2.22
THRAP10827 EBAG9P1-201ENST00000418955 543 ntBASIC1.17□□□□□ -2.22
THRAP10827 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.17□□□□□ -2.22
THRAP10827 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.17□□□□□ -2.22
THRAP10827 FTH1P12-201ENST00000432137 551 ntBASIC1.17□□□□□ -2.22
THRAP10827 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.17□□□□□ -2.22
THRAP10827 AC002486.1-201ENST00000435098 391 ntBASIC1.17□□□□□ -2.22
THRAP10827 AC132479.1-201ENST00000449160 144 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms