Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 Y_RNA.152-201ENST00000363578 100 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 Y_RNA.358-201ENST00000365491 99 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 CD24P4-201ENST00000382840 243 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.28□□□□□ -1.88
SNRPA1P09661 BMS1P22-201ENST00000414726 313 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 AL358453.1-201ENST00000422522 250 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SNRPA1P09661 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.28□□□□□ -1.88
SNRPA1P09661 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.28□□□□□ -1.88
SNRPA1P09661 AC007969.2-201ENST00000441891 191 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 OSTCP8-201ENST00000445117 448 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 AC010099.1-201ENST00000455434 375 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 MED28P2-201ENST00000475771 317 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 AC093852.1-201ENST00000503587 266 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.28□□□□□ -1.88
SNRPA1P09661 RNU7-175P-201ENST00000515915 61 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 Y_RNA.706-201ENST00000516933 99 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 AC006199.1-201ENST00000548728 219 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 CR383656.8-201ENST00000549046 145 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 AC104581.2-201ENST00000572227 430 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 SNORD53-201ENST00000579969 78 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 AC019159.1-201ENST00000605094 187 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 AC100812.1-201ENST00000607622 580 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 AC007792.1-201ENST00000623023 402 ntBASIC3.28□□□□□ -1.88
SNRPA1P09661 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.28□□□□□ -1.88
SNRPA1P09661 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.27□□□□□ -1.89
SNRPA1P09661 AP000560.1-201ENST00000624150 1937 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNRPA1P09661 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SNRPA1P09661 RPL21P1-201ENST00000399532 476 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 MIR887-201ENST00000401258 79 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.27□□□□□ -1.89
SNRPA1P09661 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.27□□□□□ -1.89
SNRPA1P09661 AL353705.4-201ENST00000449661 238 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.27□□□□□ -1.89
SNRPA1P09661 AL031183.1-201ENST00000457667 207 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 AC103975.1-201ENST00000482506 483 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 RPL30P1-201ENST00000488676 339 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 SNORA31.23-201ENST00000517219 133 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.27□□□□□ -1.89
SNRPA1P09661 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.27□□□□□ -1.89
SNRPA1P09661 AC090517.1-201ENST00000569307 266 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 AC010928.2-201ENST00000588017 287 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 RPL23AP78-201ENST00000599928 470 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 RPS29P30-201ENST00000600975 111 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
SNRPA1P09661 FAM35CP-201ENST00000554755 2470 ntBASIC3.27□□□□□ -1.89
SNRPA1P09661 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNRPA1P09661 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SNRPA1P09661 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SNRPA1P09661 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SNRPA1P09661 Y_RNA.26-201ENST00000362539 101 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 RNA5SP139-201ENST00000364340 117 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 SNORD32A-201ENST00000364805 84 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 Y_RNA.526-201ENST00000384572 110 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 Y_RNA.551-201ENST00000384661 102 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 MIR544A-201ENST00000384855 91 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 MIR181B1-201ENST00000385240 110 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 RNA5SP252-201ENST00000391131 119 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 MTCYBP2-201ENST00000407745 171 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 MTCO3P19-201ENST00000415864 321 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 AC073910.1-201ENST00000445047 438 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.26□□□□□ -1.89
SNRPA1P09661 PCNPP5-201ENST00000452246 481 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 snoU13.30-201ENST00000458951 104 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 U8.22-201ENST00000459141 133 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.26□□□□□ -1.89
SNRPA1P09661 AP002884.2-201ENST00000471647 395 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.26□□□□□ -1.89
SNRPA1P09661 RNU1-41P-201ENST00000516161 162 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 RNU1-48P-201ENST00000516400 162 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 RNU6-911P-201ENST00000516523 104 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 MYL12BP1-201ENST00000569826 507 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 AC009163.5-201ENST00000575421 637 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.26□□□□□ -1.89
SNRPA1P09661 AL390123.1-201ENST00000603216 237 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 AL159153.1-201ENST00000619688 317 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 MIR3199-2-201ENST00000636243 86 ntBASIC3.26□□□□□ -1.89
SNRPA1P09661 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNRPA1P09661 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.25□□□□□ -1.89
SNRPA1P09661 RNA5SP289-201ENST00000362332 137 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 Y_RNA.214-201ENST00000364201 112 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 Y_RNA.222-201ENST00000364264 102 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 RNU4-50P-201ENST00000364361 141 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 RNU4-9P-201ENST00000364951 139 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 RNU6-806P-201ENST00000365147 105 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 SNORA63.7-201ENST00000365579 123 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.25□□□□□ -1.89
SNRPA1P09661 RNU6-1286P-201ENST00000383871 107 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 Y_RNA.471-201ENST00000384312 102 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 AC023141.4-201ENST00000412031 328 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.25□□□□□ -1.89
SNRPA1P09661 ELOCP20-201ENST00000422460 345 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 AC009296.1-201ENST00000443146 155 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 RPL23AP75-201ENST00000491601 451 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 RNA5SP24-201ENST00000516478 95 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 ACA59.2-201ENST00000517061 156 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 AC109329.1-201ENST00000518744 317 ntBASIC3.25□□□□□ -1.89
SNRPA1P09661 AC090425.1-201ENST00000610007 140 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms