Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC008669.1-201ENST00000565823 2178 ntBASIC2.65□□□□□ -1.99
MMP3P08254 MTND5P6-201ENST00000422338 1798 ntBASIC2.64□□□□□ -1.99
MMP3P08254 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.64□□□□□ -1.99
MMP3P08254 RNY1P16-201ENST00000363063 111 ntBASIC2.64□□□□□ -1.99
MMP3P08254 RNU6-529P-201ENST00000363383 104 ntBASIC2.64□□□□□ -1.99
MMP3P08254 RNY3P11-201ENST00000364153 102 ntBASIC2.64□□□□□ -1.99
MMP3P08254 RNU6-968P-201ENST00000384076 107 ntBASIC2.64□□□□□ -1.99
MMP3P08254 RNU6-784P-201ENST00000384330 106 ntBASIC2.64□□□□□ -1.99
MMP3P08254 SNORA41-201ENST00000384675 132 ntBASIC2.64□□□□□ -1.99
MMP3P08254 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.64□□□□□ -1.99
MMP3P08254 DPH3P2-201ENST00000422618 250 ntBASIC2.64□□□□□ -1.99
MMP3P08254 EIF4EP2-201ENST00000422816 654 ntBASIC2.64□□□□□ -1.99
MMP3P08254 Z82188.1-201ENST00000436709 154 ntBASIC2.64□□□□□ -1.99
MMP3P08254 AL441985.1-201ENST00000457727 251 ntBASIC2.64□□□□□ -1.99
MMP3P08254 Y_RNA.631-201ENST00000459607 101 ntBASIC2.64□□□□□ -1.99
MMP3P08254 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.64□□□□□ -1.99
MMP3P08254 AC068781.1-201ENST00000488231 618 ntBASIC2.64□□□□□ -1.99
MMP3P08254 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.64□□□□□ -1.99
MMP3P08254 RNU5B-3P-201ENST00000516601 115 ntBASIC2.64□□□□□ -1.99
MMP3P08254 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.64□□□□□ -1.99
MMP3P08254 AC060766.3-201ENST00000591442 263 ntBASIC2.64□□□□□ -1.99
MMP3P08254 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.64□□□□□ -1.99
MMP3P08254 MIR1244-1-201ENST00000612829 85 ntBASIC2.64□□□□□ -1.99
MMP3P08254 AC134503.1-201ENST00000633048 54 ntBASIC2.64□□□□□ -1.99
MMP3P08254 MIR1244-3-201ENST00000635744 85 ntBASIC2.64□□□□□ -1.99
MMP3P08254 MIR1244-2-201ENST00000636449 85 ntBASIC2.64□□□□□ -1.99
MMP3P08254 MIR1244-4-202ENST00000636813 85 ntBASIC2.64□□□□□ -1.99
MMP3P08254 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
MMP3P08254 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
MMP3P08254 HAUS6P2-201ENST00000433254 2404 ntBASIC2.63□□□□□ -1.99
MMP3P08254 ZNF299P-201ENST00000406845 1804 ntBASIC2.63□□□□□ -1.99
MMP3P08254 AC007336.1-201ENST00000576365 3828 ntBASIC2.63□□□□□ -1.99
MMP3P08254 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
MMP3P08254 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
MMP3P08254 RNU6-487P-201ENST00000365430 104 ntBASIC2.63□□□□□ -1.99
MMP3P08254 Y_RNA.496-201ENST00000384444 101 ntBASIC2.63□□□□□ -1.99
MMP3P08254 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
MMP3P08254 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.63□□□□□ -1.99
MMP3P08254 PMCHL1-202ENST00000423102 261 ntBASIC2.63□□□□□ -1.99
MMP3P08254 RPL23AP95-201ENST00000426806 265 ntBASIC2.63□□□□□ -1.99
MMP3P08254 GPM6BP3-201ENST00000442797 145 ntBASIC2.63□□□□□ -1.99
MMP3P08254 OSTCP8-201ENST00000445117 448 ntBASIC2.63□□□□□ -1.99
MMP3P08254 RPL39P40-201ENST00000445481 146 ntBASIC2.63□□□□□ -1.99
MMP3P08254 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.63□□□□□ -1.99
MMP3P08254 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.63□□□□□ -1.99
MMP3P08254 RPL31P41-201ENST00000477967 372 ntBASIC2.63□□□□□ -1.99
MMP3P08254 RPL36AP48-201ENST00000485521 314 ntBASIC2.63□□□□□ -1.99
MMP3P08254 SNORA31.16-201ENST00000516773 139 ntBASIC2.63□□□□□ -1.99
MMP3P08254 ELOCP31-201ENST00000540463 467 ntBASIC2.63□□□□□ -1.99
MMP3P08254 AC007375.1-201ENST00000554513 578 ntBASIC2.63□□□□□ -1.99
MMP3P08254 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.63□□□□□ -1.99
MMP3P08254 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.63□□□□□ -1.99
MMP3P08254 AC005899.2-201ENST00000584353 90 ntBASIC2.63□□□□□ -1.99
MMP3P08254 SNRPGP17-201ENST00000603780 214 ntBASIC2.63□□□□□ -1.99
MMP3P08254 AC007485.1-201ENST00000616755 206 ntBASIC2.63□□□□□ -1.99
MMP3P08254 AP006437.1-201ENST00000641440 3685 ntBASIC2.63□□□□□ -1.99
MMP3P08254 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.62□□□□□ -1.99
MMP3P08254 AC233981.2-201ENST00000611524 1614 ntBASIC2.62□□□□□ -1.99
MMP3P08254 VTRNA1-1-201ENST00000363120 99 ntBASIC2.62□□□□□ -1.99
MMP3P08254 RNU1-91P-201ENST00000364746 163 ntBASIC2.62□□□□□ -1.99
MMP3P08254 Y_RNA.395-201ENST00000383945 109 ntBASIC2.62□□□□□ -1.99
MMP3P08254 RNU6-1222P-201ENST00000384615 107 ntBASIC2.62□□□□□ -1.99
MMP3P08254 MIR487A-201ENST00000385009 80 ntBASIC2.62□□□□□ -1.99
MMP3P08254 MIR1289-2-201ENST00000408360 111 ntBASIC2.62□□□□□ -1.99
MMP3P08254 RNA5SP390-201ENST00000410191 113 ntBASIC2.62□□□□□ -1.99
MMP3P08254 RNA5SP494-201ENST00000410653 129 ntBASIC2.62□□□□□ -1.99
MMP3P08254 RNU6-1328P-201ENST00000410938 106 ntBASIC2.62□□□□□ -1.99
MMP3P08254 HMGN2P35-201ENST00000412164 270 ntBASIC2.62□□□□□ -1.99
MMP3P08254 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.62□□□□□ -1.99
MMP3P08254 AL358075.3-201ENST00000426289 226 ntBASIC2.62□□□□□ -1.99
MMP3P08254 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MMP3P08254 AL137792.2-201ENST00000443484 235 ntBASIC2.62□□□□□ -1.99
MMP3P08254 IFNA11P-201ENST00000446352 526 ntBASIC2.62□□□□□ -1.99
MMP3P08254 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.62□□□□□ -1.99
MMP3P08254 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.62□□□□□ -1.99
MMP3P08254 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MMP3P08254 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.62□□□□□ -1.99
MMP3P08254 snoU13.6-201ENST00000458785 104 ntBASIC2.62□□□□□ -1.99
MMP3P08254 AF186996.7-201ENST00000492781 209 ntBASIC2.62□□□□□ -1.99
MMP3P08254 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.62□□□□□ -1.99
MMP3P08254 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.62□□□□□ -1.99
MMP3P08254 AIG1P1-201ENST00000503376 148 ntBASIC2.62□□□□□ -1.99
MMP3P08254 SMURF2P1-201ENST00000514992 481 ntBASIC2.62□□□□□ -1.99
MMP3P08254 RNU6-307P-201ENST00000516743 106 ntBASIC2.62□□□□□ -1.99
MMP3P08254 RNU6-264P-201ENST00000517134 104 ntBASIC2.62□□□□□ -1.99
MMP3P08254 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.62□□□□□ -1.99
MMP3P08254 SNRPGP18-201ENST00000553000 214 ntBASIC2.62□□□□□ -1.99
MMP3P08254 DEFB122-202ENST00000569013 197 ntBASIC2.62□□□□□ -1.99
MMP3P08254 AC105137.2-201ENST00000569073 466 ntBASIC2.62□□□□□ -1.99
MMP3P08254 MIR5696-201ENST00000578474 85 ntBASIC2.62□□□□□ -1.99
MMP3P08254 AC067747.1-201ENST00000608026 250 ntBASIC2.62□□□□□ -1.99
MMP3P08254 AC040896.1-201ENST00000613819 479 ntBASIC2.62□□□□□ -1.99
MMP3P08254 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.62□□□□□ -1.99
MMP3P08254 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MMP3P08254 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.61□□□□□ -1.99
MMP3P08254 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
MMP3P08254 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MMP3P08254 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
MMP3P08254 AL109809.4-201ENST00000603520 2185 ntBASIC2.61□□□□□ -1.99
MMP3P08254 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms