Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC090897.2-201ENST00000581715 130 ntBASIC3.01□□□□□ -1.93
RHOP08100 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.01□□□□□ -1.93
RHOP08100 AC091564.4-201ENST00000533934 2194 ntBASIC3.01□□□□□ -1.93
RHOP08100 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
RHOP08100 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RHOP08100 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
RHOP08100 Y_RNA.183-201ENST00000363882 113 ntBASIC3□□□□□ -1.93
RHOP08100 Y_RNA.396-201ENST00000383949 103 ntBASIC3□□□□□ -1.93
RHOP08100 SNORA29-201ENST00000384183 140 ntBASIC3□□□□□ -1.93
RHOP08100 RPS15AP5-201ENST00000436276 388 ntBASIC3□□□□□ -1.93
RHOP08100 RPL23AP22-201ENST00000437556 453 ntBASIC3□□□□□ -1.93
RHOP08100 RN7SL283P-201ENST00000489055 303 ntBASIC3□□□□□ -1.93
RHOP08100 AC016632.1-201ENST00000503994 196 ntBASIC3□□□□□ -1.93
RHOP08100 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3□□□□□ -1.93
RHOP08100 RNU6-408P-201ENST00000515910 100 ntBASIC3□□□□□ -1.93
RHOP08100 RNY3P15-201ENST00000516297 97 ntBASIC3□□□□□ -1.93
RHOP08100 SNORA64.4-201ENST00000516632 81 ntBASIC3□□□□□ -1.93
RHOP08100 SNORA40.15-201ENST00000516884 107 ntBASIC3□□□□□ -1.93
RHOP08100 RNU6-897P-201ENST00000517135 105 ntBASIC3□□□□□ -1.93
RHOP08100 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3□□□□□ -1.93
RHOP08100 AC107294.3-201ENST00000609211 526 ntBASIC3□□□□□ -1.93
RHOP08100 AC062037.2-201ENST00000610137 73 ntBASIC3□□□□□ -1.93
RHOP08100 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RHOP08100 AC130454.1-201ENST00000622948 401 ntBASIC3□□□□□ -1.93
RHOP08100 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3□□□□□ -1.93
RHOP08100 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3□□□□□ -1.93
RHOP08100 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RHOP08100 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RHOP08100 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RHOP08100 AC092268.1-201ENST00000342691 405 ntBASIC2.99□□□□□ -1.93
RHOP08100 RNU6-770P-201ENST00000363929 105 ntBASIC2.99□□□□□ -1.93
RHOP08100 RNU6-708P-201ENST00000384217 107 ntBASIC2.99□□□□□ -1.93
RHOP08100 MIR544A-201ENST00000384855 91 ntBASIC2.99□□□□□ -1.93
RHOP08100 MIR153-2-201ENST00000385225 87 ntBASIC2.99□□□□□ -1.93
RHOP08100 RNU1-139P-201ENST00000391307 165 ntBASIC2.99□□□□□ -1.93
RHOP08100 RNU6-130P-201ENST00000411112 103 ntBASIC2.99□□□□□ -1.93
RHOP08100 AC078809.1-201ENST00000427601 140 ntBASIC2.99□□□□□ -1.93
RHOP08100 PCNPP5-201ENST00000452246 481 ntBASIC2.99□□□□□ -1.93
RHOP08100 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.99□□□□□ -1.93
RHOP08100 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.99□□□□□ -1.93
RHOP08100 SNORD109B-201ENST00000458961 67 ntBASIC2.99□□□□□ -1.93
RHOP08100 SNORD109A-201ENST00000459128 67 ntBASIC2.99□□□□□ -1.93
RHOP08100 TOMM22P6-201ENST00000465035 409 ntBASIC2.99□□□□□ -1.93
RHOP08100 AC087477.1-201ENST00000465747 340 ntBASIC2.99□□□□□ -1.93
RHOP08100 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.99□□□□□ -1.93
RHOP08100 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.99□□□□□ -1.93
RHOP08100 AC068657.1-201ENST00000520807 306 ntBASIC2.99□□□□□ -1.93
RHOP08100 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.99□□□□□ -1.93
RHOP08100 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.99□□□□□ -1.93
RHOP08100 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
RHOP08100 AC125232.2-201ENST00000592457 143 ntBASIC2.99□□□□□ -1.93
RHOP08100 AC091152.3-201ENST00000604227 325 ntBASIC2.99□□□□□ -1.93
RHOP08100 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.99□□□□□ -1.93
RHOP08100 AC137590.2-201ENST00000619709 240 ntBASIC2.99□□□□□ -1.93
RHOP08100 AL450472.1-202ENST00000637286 180 ntBASIC2.99□□□□□ -1.93
RHOP08100 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RHOP08100 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.98□□□□□ -1.93
RHOP08100 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.98□□□□□ -1.93
RHOP08100 RBBP8P1-201ENST00000449447 1844 ntBASIC2.98□□□□□ -1.93
RHOP08100 OR56A5-201ENST00000340110 738 ntBASIC2.98□□□□□ -1.93
RHOP08100 RNU6-1285P-201ENST00000363480 105 ntBASIC2.98□□□□□ -1.93
RHOP08100 SNORD56.3-201ENST00000363507 71 ntBASIC2.98□□□□□ -1.93
RHOP08100 Y_RNA.458-201ENST00000384240 102 ntBASIC2.98□□□□□ -1.93
RHOP08100 Y_RNA.461-201ENST00000384263 103 ntBASIC2.98□□□□□ -1.93
RHOP08100 RNU6-748P-201ENST00000384648 107 ntBASIC2.98□□□□□ -1.93
RHOP08100 RNU2-52P-201ENST00000410680 190 ntBASIC2.98□□□□□ -1.93
RHOP08100 U8.22-201ENST00000459141 133 ntBASIC2.98□□□□□ -1.93
RHOP08100 RNU7-87P-201ENST00000459343 62 ntBASIC2.98□□□□□ -1.93
RHOP08100 RN7SL633P-201ENST00000488974 297 ntBASIC2.98□□□□□ -1.93
RHOP08100 AC010469.2-201ENST00000496412 480 ntBASIC2.98□□□□□ -1.93
RHOP08100 RNU2-53P-201ENST00000516257 147 ntBASIC2.98□□□□□ -1.93
RHOP08100 Y_RNA.713-201ENST00000517013 96 ntBASIC2.98□□□□□ -1.93
RHOP08100 RNU6-1271P-201ENST00000517049 105 ntBASIC2.98□□□□□ -1.93
RHOP08100 SNORA31.21-201ENST00000517180 77 ntBASIC2.98□□□□□ -1.93
RHOP08100 HSPE1P20-201ENST00000538133 289 ntBASIC2.98□□□□□ -1.93
RHOP08100 HSPE1P4-201ENST00000550617 308 ntBASIC2.98□□□□□ -1.93
RHOP08100 IGHVIII-44-202ENST00000636235 289 ntBASIC2.98□□□□□ -1.93
RHOP08100 U6.92-201ENST00000636464 89 ntBASIC2.98□□□□□ -1.93
RHOP08100 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
RHOP08100 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
RHOP08100 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RHOP08100 AC002543.1-201ENST00000299783 1954 ntBASIC2.98□□□□□ -1.93
RHOP08100 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RHOP08100 RNU4-82P-201ENST00000362443 140 ntBASIC2.97□□□□□ -1.93
RHOP08100 Y_RNA.19-201ENST00000362462 99 ntBASIC2.97□□□□□ -1.93
RHOP08100 RNU6-137P-201ENST00000363680 108 ntBASIC2.97□□□□□ -1.93
RHOP08100 Y_RNA.288-201ENST00000364854 92 ntBASIC2.97□□□□□ -1.93
RHOP08100 U8.10-201ENST00000384260 133 ntBASIC2.97□□□□□ -1.93
RHOP08100 RNA5SP213-201ENST00000391031 106 ntBASIC2.97□□□□□ -1.93
RHOP08100 RPS26P42-201ENST00000413485 326 ntBASIC2.97□□□□□ -1.93
RHOP08100 AC096649.2-201ENST00000416186 393 ntBASIC2.97□□□□□ -1.93
RHOP08100 CYCSP48-201ENST00000417124 323 ntBASIC2.97□□□□□ -1.93
RHOP08100 PTGES3P4-201ENST00000426243 356 ntBASIC2.97□□□□□ -1.93
RHOP08100 USP9YP16-201ENST00000430287 407 ntBASIC2.97□□□□□ -1.93
RHOP08100 AC009969.1-201ENST00000438726 172 ntBASIC2.97□□□□□ -1.93
RHOP08100 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.97□□□□□ -1.93
RHOP08100 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.97□□□□□ -1.93
RHOP08100 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.97□□□□□ -1.93
RHOP08100 USP9YP23-201ENST00000455085 407 ntBASIC2.97□□□□□ -1.93
RHOP08100 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms