Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC242628.1-201ENST00000606810 391 ntBASIC-0.45□□□□□ -2.48
APOBP04114 AC016542.1-201ENST00000608259 493 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.46□□□□□ -2.48
APOBP04114 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.46□□□□□ -2.48
APOBP04114 RNU6-40P-201ENST00000384254 107 ntBASIC-0.46□□□□□ -2.48
APOBP04114 RNA5SP323-201ENST00000391094 133 ntBASIC-0.46□□□□□ -2.48
APOBP04114 MIR548L-201ENST00000408303 86 ntBASIC-0.46□□□□□ -2.48
APOBP04114 Y_RNA.616-201ENST00000410835 95 ntBASIC-0.46□□□□□ -2.48
APOBP04114 RNU6-370P-201ENST00000411008 104 ntBASIC-0.46□□□□□ -2.48
APOBP04114 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.46□□□□□ -2.48
APOBP04114 MTCO3P10-201ENST00000455912 772 ntBASIC-0.46□□□□□ -2.48
APOBP04114 RNU6-586P-201ENST00000517265 104 ntBASIC-0.46□□□□□ -2.48
APOBP04114 SUMO2P18-201ENST00000518873 252 ntBASIC-0.46□□□□□ -2.48
APOBP04114 AC040926.1-201ENST00000530195 238 ntBASIC-0.46□□□□□ -2.48
APOBP04114 AP000763.2-201ENST00000540641 163 ntBASIC-0.46□□□□□ -2.48
APOBP04114 LRRC34P1-201ENST00000542742 915 ntBASIC-0.46□□□□□ -2.48
APOBP04114 AC138869.1-201ENST00000568623 124 ntBASIC-0.46□□□□□ -2.48
APOBP04114 MIR3612-201ENST00000579753 87 ntBASIC-0.46□□□□□ -2.48
APOBP04114 MTND4P8-201ENST00000514997 1362 ntBASIC-0.46□□□□□ -2.48
APOBP04114 SNORA25.7-201ENST00000364375 127 ntBASIC-0.46□□□□□ -2.48
APOBP04114 AC027644.1-201ENST00000419595 298 ntBASIC-0.46□□□□□ -2.48
APOBP04114 AC093249.1-201ENST00000567049 203 ntBASIC-0.46□□□□□ -2.48
APOBP04114 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
APOBP04114 MIR3529-201ENST00000637713 78 ntBASIC-0.46□□□□□ -2.48
APOBP04114 MTND4P4-201ENST00000439033 1366 ntBASIC-0.46□□□□□ -2.48
APOBP04114 Y_RNA.204-201ENST00000364112 102 ntBASIC-0.46□□□□□ -2.48
APOBP04114 RNU6-898P-201ENST00000365627 104 ntBASIC-0.46□□□□□ -2.48
APOBP04114 AC006210.1-201ENST00000424882 111 ntBASIC-0.46□□□□□ -2.48
APOBP04114 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.46□□□□□ -2.48
APOBP04114 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-0.46□□□□□ -2.48
APOBP04114 AC079354.2-201ENST00000453523 154 ntBASIC-0.46□□□□□ -2.48
APOBP04114 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.46□□□□□ -2.48
APOBP04114 U2.21-201ENST00000637295 81 ntBASIC-0.46□□□□□ -2.48
APOBP04114 AC011233.1-201ENST00000422812 283 ntBASIC-0.47□□□□□ -2.48
APOBP04114 MTND2P5-201ENST00000432656 1006 ntBASIC-0.47□□□□□ -2.48
APOBP04114 AC113420.1-201ENST00000507903 571 ntBASIC-0.47□□□□□ -2.48
APOBP04114 AC074133.1-201ENST00000515696 183 ntBASIC-0.47□□□□□ -2.48
APOBP04114 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC-0.47□□□□□ -2.48
APOBP04114 AL109620.1-201ENST00000618738 1197 ntBASIC-0.47□□□□□ -2.48
APOBP04114 AC006504.8-201ENST00000621046 635 ntBASIC-0.47□□□□□ -2.48
APOBP04114 U6.99-201ENST00000637524 83 ntBASIC-0.47□□□□□ -2.48
APOBP04114 MTND4P5-201ENST00000435821 1374 ntBASIC-0.47□□□□□ -2.48
APOBP04114 RNU6-858P-201ENST00000362436 107 ntBASIC-0.47□□□□□ -2.48
APOBP04114 SNORA72.2-201ENST00000365028 127 ntBASIC-0.47□□□□□ -2.48
APOBP04114 MIR454-201ENST00000390180 115 ntBASIC-0.47□□□□□ -2.48
APOBP04114 AL079342.2-201ENST00000403367 482 ntBASIC-0.47□□□□□ -2.48
APOBP04114 RNU6-994P-201ENST00000410507 111 ntBASIC-0.47□□□□□ -2.48
APOBP04114 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-0.47□□□□□ -2.48
APOBP04114 C1DP2-201ENST00000418167 426 ntBASIC-0.47□□□□□ -2.48
APOBP04114 MTCO2P1-201ENST00000424648 477 ntBASIC-0.47□□□□□ -2.48
APOBP04114 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.47□□□□□ -2.48
APOBP04114 AC023512.1-201ENST00000444513 499 ntBASIC-0.47□□□□□ -2.48
APOBP04114 C1DP4-201ENST00000455429 424 ntBASIC-0.47□□□□□ -2.48
APOBP04114 AC027338.1-201ENST00000514840 825 ntBASIC-0.47□□□□□ -2.48
APOBP04114 AC126365.2-201ENST00000580630 379 ntBASIC-0.47□□□□□ -2.48
APOBP04114 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.47□□□□□ -2.48
APOBP04114 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.47□□□□□ -2.48
APOBP04114 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.47□□□□□ -2.48
APOBP04114 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.47□□□□□ -2.48
APOBP04114 HMGN3P1-201ENST00000453847 193 ntBASIC-0.47□□□□□ -2.48
APOBP04114 RNU1-86P-201ENST00000516108 154 ntBASIC-0.47□□□□□ -2.48
APOBP04114 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.47□□□□□ -2.48
APOBP04114 RNU1-107P-201ENST00000516617 154 ntBASIC-0.47□□□□□ -2.48
APOBP04114 AL355598.1-201ENST00000604169 202 ntBASIC-0.47□□□□□ -2.48
APOBP04114 MIR649-201ENST00000384843 97 ntBASIC-0.47□□□□□ -2.49
APOBP04114 RNU6-244P-201ENST00000391028 104 ntBASIC-0.47□□□□□ -2.49
APOBP04114 MTATP6P31-201ENST00000406985 692 ntBASIC-0.47□□□□□ -2.49
APOBP04114 AL592310.1-201ENST00000414330 671 ntBASIC-0.47□□□□□ -2.49
APOBP04114 ELOCP30-201ENST00000447108 299 ntBASIC-0.47□□□□□ -2.49
APOBP04114 MTND1P9-201ENST00000453775 944 ntBASIC-0.47□□□□□ -2.49
APOBP04114 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC-0.47□□□□□ -2.49
APOBP04114 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.47□□□□□ -2.49
APOBP04114 MIR4275-201ENST00000636486 87 ntBASIC-0.47□□□□□ -2.49
APOBP04114 RNU6-441P-201ENST00000384545 106 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.48□□□□□ -2.49
APOBP04114 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.48□□□□□ -2.49
APOBP04114 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.48□□□□□ -2.49
APOBP04114 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.48□□□□□ -2.49
APOBP04114 AC137800.2-201ENST00000574375 120 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AC092809.3-201ENST00000415453 231 ntBASIC-0.48□□□□□ -2.49
APOBP04114 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.48□□□□□ -2.49
APOBP04114 AC002381.1-201ENST00000447049 280 ntBASIC-0.48□□□□□ -2.49
APOBP04114 OR6C5P-201ENST00000452388 923 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.48□□□□□ -2.49
APOBP04114 AC007215.1-201ENST00000464893 276 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AC023050.3-201ENST00000541142 333 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-0.48□□□□□ -2.49
APOBP04114 MIR4300-201ENST00000581016 96 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AC025588.3-201ENST00000604182 274 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AC006213.4-201ENST00000616184 634 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AC107982.1-201ENST00000507171 1300 ntBASIC-0.48□□□□□ -2.49
APOBP04114 LINC02555-201ENST00000563933 1951 ntBASIC-0.48□□□□□ -2.49
APOBP04114 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AC117525.1-201ENST00000515228 503 ntBASIC-0.48□□□□□ -2.49
APOBP04114 RNA5SP180-201ENST00000516181 101 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.48□□□□□ -2.49
APOBP04114 MIR4709-201ENST00000577272 72 ntBASIC-0.48□□□□□ -2.49
APOBP04114 AC018926.1-201ENST00000616335 435 ntBASIC-0.48□□□□□ -2.49
APOBP04114 RNU6-944P-201ENST00000364023 107 ntBASIC-0.48□□□□□ -2.49
APOBP04114 RNA5SP493-201ENST00000364115 91 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms