Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.97□□□□□ -2.09
MT-ND1P03886 SNORA36A-201ENST00000384221 132 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 RNU6-1106P-201ENST00000390845 107 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 Z82205.1-201ENST00000428456 297 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.97□□□□□ -2.09
MT-ND1P03886 PCMTD1P1-201ENST00000455560 355 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 AP001486.1-201ENST00000463339 476 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 RPL30P1-201ENST00000488676 339 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 AC018868.1-201ENST00000491307 315 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 SNORA31.16-201ENST00000516773 139 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 Y_RNA.702-201ENST00000516843 96 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 AC105029.1-201ENST00000520250 669 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 AC233702.2-202ENST00000562547 291 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.97□□□□□ -2.09
MT-ND1P03886 POLR3GP2-201ENST00000588366 668 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 AC019193.3-201ENST00000609144 554 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 MIR6128-201ENST00000615528 109 ntBASIC1.97□□□□□ -2.09
MT-ND1P03886 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MT-ND1P03886 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.96□□□□□ -2.1
MT-ND1P03886 RNU6-1159P-201ENST00000362933 107 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 SNORD50.1-201ENST00000362987 71 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 Y_RNA.474-201ENST00000384341 102 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 MIR521-1-201ENST00000384902 87 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 U3.40-201ENST00000408706 208 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.96□□□□□ -2.1
MT-ND1P03886 USP9YP30-201ENST00000430729 455 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 AL133396.1-201ENST00000432048 687 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 AC244670.1-201ENST00000436879 112 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 SCARNA16.3-201ENST00000516595 184 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 MRPS36P4-201ENST00000534436 298 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 HSPE1P4-201ENST00000550617 308 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.96□□□□□ -2.1
MT-ND1P03886 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 AL670379.2-201ENST00000604983 252 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 MIR8076-201ENST00000611401 83 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 uc_338.5-201ENST00000611839 155 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 AC022202.1-201ENST00000613515 211 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 AL162373.1-201ENST00000620433 407 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 SDR42E1P4-201ENST00000620894 481 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 AL359757.2-201ENST00000624309 274 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 AC008555.8-201ENST00000623602 2168 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 MTND4P12-201ENST00000498999 1377 ntBASIC1.96□□□□□ -2.1
MT-ND1P03886 RNU6-1210P-201ENST00000363775 107 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 RNU6-842P-201ENST00000384269 107 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 RNU6-790P-201ENST00000384479 105 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 CBX3P9-201ENST00000402326 552 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 RN7SKP61-201ENST00000410642 295 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 AC074085.1-201ENST00000413598 418 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.95□□□□□ -2.1
MT-ND1P03886 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND1P03886 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND1P03886 U8.21-201ENST00000459536 136 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 AL049873.1-201ENST00000480540 376 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.95□□□□□ -2.1
MT-ND1P03886 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.95□□□□□ -2.1
MT-ND1P03886 RNU6-277P-201ENST00000516272 106 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND1P03886 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.95□□□□□ -2.1
MT-ND1P03886 SNRPGP18-201ENST00000553000 214 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 AC005668.1-201ENST00000571142 476 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 MIR4287-201ENST00000579398 78 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.95□□□□□ -2.1
MT-ND1P03886 AC078795.3-201ENST00000602913 472 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 SNRPGP17-201ENST00000603780 214 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 AC124303.1-201ENST00000605703 360 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 AC090517.3-201ENST00000625170 141 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.95□□□□□ -2.1
MT-ND1P03886 AC009541.1-201ENST00000438279 2662 ntBASIC1.95□□□□□ -2.1
MT-ND1P03886 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
MT-ND1P03886 snoU2_19.1-201ENST00000362361 80 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 RNU4-15P-201ENST00000362613 141 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 Y_RNA.123-201ENST00000363338 102 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 Y_RNA.504-201ENST00000384481 104 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 BTF3L4P2-201ENST00000392798 346 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AL139396.1-201ENST00000421137 167 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AC107399.1-201ENST00000451226 265 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AL137159.1-201ENST00000452808 512 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 FO393415.2-201ENST00000480085 343 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 HMGB1P35-201ENST00000503360 598 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND1P03886 AC116337.1-201ENST00000509680 687 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AC005741.1-201ENST00000511094 432 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AC026782.1-201ENST00000512952 449 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND1P03886 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
MT-ND1P03886 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.94□□□□□ -2.1
MT-ND1P03886 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AC243960.4-201ENST00000600532 288 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AL356157.2-201ENST00000605122 111 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AC016727.1-205ENST00000605437 569 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 AL132765.2-201ENST00000610812 351 ntBASIC1.94□□□□□ -2.1
MT-ND1P03886 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
MT-ND1P03886 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
MT-ND1P03886 RNU6-867P-201ENST00000364956 107 ntBASIC1.93□□□□□ -2.1
MT-ND1P03886 RNU6-784P-201ENST00000384330 106 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms