Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.48□□□□□ -2.33
COL1A1P02452 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.48□□□□□ -2.33
COL1A1P02452 RNU4-15P-201ENST00000362613 141 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 Y_RNA.46-201ENST00000362695 102 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 RNU6-1285P-201ENST00000363480 105 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 RNU6-384P-201ENST00000364900 104 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 SNORD114-24-201ENST00000365029 72 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 RNY4P3-201ENST00000365254 95 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 RNU6-1176P-201ENST00000390955 107 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 MTATP6P20-201ENST00000414147 562 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 ARL5AP1-201ENST00000418991 388 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AL353777.1-201ENST00000425552 326 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 SNRPEP8-201ENST00000442866 260 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.48□□□□□ -2.33
COL1A1P02452 MTCO3P9-201ENST00000506989 781 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.48□□□□□ -2.33
COL1A1P02452 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.48□□□□□ -2.33
COL1A1P02452 RNA5SP503-201ENST00000517047 117 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.48□□□□□ -2.33
COL1A1P02452 AC123904.2-201ENST00000548059 300 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AC087883.1-201ENST00000551882 391 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.48□□□□□ -2.33
COL1A1P02452 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.48□□□□□ -2.33
COL1A1P02452 MIR5692A1-201ENST00000580523 69 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AC008088.1-201ENST00000580993 280 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.48□□□□□ -2.33
COL1A1P02452 DEFB131E-202ENST00000602581 683 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AL158211.2-201ENST00000607282 395 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AC106858.1-201ENST00000637497 429 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AL159152.1-201ENST00000635019 2587 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 RNU6-862P-201ENST00000362804 105 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 RNU5E-7P-201ENST00000365290 117 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 SNORA12-201ENST00000391162 147 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 AL356776.1-201ENST00000406574 447 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 RNU6-733P-201ENST00000410759 104 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 RNU6-1245P-201ENST00000411130 106 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 AC114491.1-201ENST00000416095 246 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 MTCO1P21-201ENST00000416634 589 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 AC010099.3-201ENST00000423896 409 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 AC137499.1-201ENST00000427602 88 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.47□□□□□ -2.33
COL1A1P02452 EEF1A1P39-201ENST00000440791 250 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 MTND1P30-201ENST00000441241 901 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 AP000797.1-201ENST00000478870 387 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 RNU7-51P-201ENST00000516560 62 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 AC107934.1-201ENST00000522215 217 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 MIR3136-201ENST00000583498 78 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 AC112187.2-201ENST00000604345 283 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 AC069114.2-201ENST00000604699 304 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.47□□□□□ -2.33
COL1A1P02452 Y_RNA.132-201ENST00000363421 102 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 SNORD114-15-201ENST00000364687 72 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 RNU4-56P-201ENST00000364700 142 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 MIR194-1-201ENST00000384892 85 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 RPS20P2-201ENST00000402520 389 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 RNA5SP111-201ENST00000411386 101 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 MTCO3P29-201ENST00000432119 779 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.46□□□□□ -2.34
COL1A1P02452 AC069257.2-201ENST00000441819 155 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 AL358794.1-201ENST00000445689 381 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 RAP1BP2-201ENST00000478270 544 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 SNORD60.2-201ENST00000516883 86 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.46□□□□□ -2.34
COL1A1P02452 AP002453.2-201ENST00000533503 320 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 MIR3118-1-201ENST00000581787 76 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 MIR4307-201ENST00000582802 84 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 AL139286.2-201ENST00000606838 396 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 AL365434.2-201ENST00000607979 234 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 AC092106.3-201ENST00000611308 722 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.46□□□□□ -2.34
COL1A1P02452 AC013437.2-201ENST00000639587 677 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 AL445523.1-201ENST00000451184 1362 ntBASIC0.46□□□□□ -2.34
COL1A1P02452 RNU6-433P-201ENST00000363216 104 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 RNY4P16-201ENST00000364768 94 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 MIR10B-201ENST00000385011 110 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
COL1A1P02452 RPS3AP37-201ENST00000419176 745 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.45□□□□□ -2.34
COL1A1P02452 AL606489.2-201ENST00000433886 234 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 AC099677.2-201ENST00000436385 175 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 MTCYBP39-201ENST00000437562 491 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 MTND3P1-201ENST00000441336 220 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.45□□□□□ -2.34
COL1A1P02452 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.45□□□□□ -2.34
COL1A1P02452 snoU13.30-201ENST00000458951 104 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 RPS26P45-201ENST00000471748 340 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.45□□□□□ -2.34
COL1A1P02452 AC091435.1-201ENST00000505442 584 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 MTCO3P28-201ENST00000513351 515 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 RNU6-197P-201ENST00000516680 100 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 RNU4-77P-201ENST00000516692 156 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 AP001893.2-201ENST00000526949 202 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 AP003168.1-201ENST00000530091 307 ntBASIC0.45□□□□□ -2.34
COL1A1P02452 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.45□□□□□ -2.34
COL1A1P02452 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.45□□□□□ -2.34
COL1A1P02452 MIR3923-201ENST00000579521 83 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms