Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.45□□□□□ -2.02
RTN3O95197 RNU7-193P-201ENST00000516723 65 ntBASIC2.45□□□□□ -2.02
RTN3O95197 HSPE1P18-201ENST00000517602 280 ntBASIC2.45□□□□□ -2.02
RTN3O95197 AC233702.2-202ENST00000562547 291 ntBASIC2.45□□□□□ -2.02
RTN3O95197 AC109446.1-201ENST00000566172 220 ntBASIC2.45□□□□□ -2.02
RTN3O95197 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.45□□□□□ -2.02
RTN3O95197 ZNF658B-202ENST00000615961 3375 ntBASIC2.45□□□□□ -2.02
RTN3O95197 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
RTN3O95197 AP006437.1-201ENST00000641440 3685 ntBASIC2.45□□□□□ -2.02
RTN3O95197 AL596028.1-201ENST00000326971 197 ntBASIC2.44□□□□□ -2.02
RTN3O95197 Y_RNA.72-201ENST00000362894 103 ntBASIC2.44□□□□□ -2.02
RTN3O95197 SNORA29-201ENST00000384183 140 ntBASIC2.44□□□□□ -2.02
RTN3O95197 MIR208B-201ENST00000401172 77 ntBASIC2.44□□□□□ -2.02
RTN3O95197 AL356776.1-201ENST00000406574 447 ntBASIC2.44□□□□□ -2.02
RTN3O95197 SNORA3.2-201ENST00000408221 125 ntBASIC2.44□□□□□ -2.02
RTN3O95197 RNA5SP425-201ENST00000410336 112 ntBASIC2.44□□□□□ -2.02
RTN3O95197 AL139415.2-201ENST00000431968 163 ntBASIC2.44□□□□□ -2.02
RTN3O95197 IPO7P1-201ENST00000442031 636 ntBASIC2.44□□□□□ -2.02
RTN3O95197 PRELID3BP1-201ENST00000457142 540 ntBASIC2.44□□□□□ -2.02
RTN3O95197 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.44□□□□□ -2.02
RTN3O95197 ANXA2P1-201ENST00000505539 926 ntBASIC2.44□□□□□ -2.02
RTN3O95197 AC018710.1-201ENST00000506509 158 ntBASIC2.44□□□□□ -2.02
RTN3O95197 RNU6-1088P-201ENST00000516850 104 ntBASIC2.44□□□□□ -2.02
RTN3O95197 RNA5SP454-201ENST00000517231 127 ntBASIC2.44□□□□□ -2.02
RTN3O95197 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.44□□□□□ -2.02
RTN3O95197 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.44□□□□□ -2.02
RTN3O95197 AP005639.2-201ENST00000527592 928 ntBASIC2.44□□□□□ -2.02
RTN3O95197 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.44□□□□□ -2.02
RTN3O95197 EIF4A1P12-201ENST00000551910 141 ntBASIC2.44□□□□□ -2.02
RTN3O95197 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.44□□□□□ -2.02
RTN3O95197 POLR3GP2-201ENST00000588366 668 ntBASIC2.44□□□□□ -2.02
RTN3O95197 AL022345.1-201ENST00000607292 135 ntBASIC2.44□□□□□ -2.02
RTN3O95197 AC019193.3-201ENST00000609144 554 ntBASIC2.44□□□□□ -2.02
RTN3O95197 AC022202.1-201ENST00000613515 211 ntBASIC2.44□□□□□ -2.02
RTN3O95197 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.44□□□□□ -2.02
RTN3O95197 MIR1248-201ENST00000629190 106 ntBASIC2.44□□□□□ -2.02
RTN3O95197 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RTN3O95197 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
RTN3O95197 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RTN3O95197 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RTN3O95197 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
RTN3O95197 RNU6-26P-201ENST00000383985 107 ntBASIC2.43□□□□□ -2.02
RTN3O95197 RNU6-378P-201ENST00000384324 107 ntBASIC2.43□□□□□ -2.02
RTN3O95197 SNORD23.1-201ENST00000408212 104 ntBASIC2.43□□□□□ -2.02
RTN3O95197 RN7SKP192-201ENST00000411291 327 ntBASIC2.43□□□□□ -2.02
RTN3O95197 SRIP3-201ENST00000413200 219 ntBASIC2.43□□□□□ -2.02
RTN3O95197 AL139396.1-201ENST00000421137 167 ntBASIC2.43□□□□□ -2.02
RTN3O95197 MTND1P2-201ENST00000430604 821 ntBASIC2.43□□□□□ -2.02
RTN3O95197 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.43□□□□□ -2.02
RTN3O95197 AC245102.2-201ENST00000448956 180 ntBASIC2.43□□□□□ -2.02
RTN3O95197 ACA59.1-201ENST00000515966 143 ntBASIC2.43□□□□□ -2.02
RTN3O95197 RNU6-566P-201ENST00000516790 107 ntBASIC2.43□□□□□ -2.02
RTN3O95197 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.43□□□□□ -2.02
RTN3O95197 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.43□□□□□ -2.02
RTN3O95197 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.43□□□□□ -2.02
RTN3O95197 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.43□□□□□ -2.02
RTN3O95197 AC124303.1-201ENST00000605703 360 ntBASIC2.43□□□□□ -2.02
RTN3O95197 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RTN3O95197 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RTN3O95197 MIR21-201ENST00000362134 72 ntBASIC2.42□□□□□ -2.02
RTN3O95197 RNU5B-2P-201ENST00000363036 113 ntBASIC2.42□□□□□ -2.02
RTN3O95197 U8.2-201ENST00000363156 134 ntBASIC2.42□□□□□ -2.02
RTN3O95197 RNU6-743P-201ENST00000364151 106 ntBASIC2.42□□□□□ -2.02
RTN3O95197 Y_RNA.301-201ENST00000364990 103 ntBASIC2.42□□□□□ -2.02
RTN3O95197 SNORA40.19-201ENST00000390846 128 ntBASIC2.42□□□□□ -2.02
RTN3O95197 Z98742.3-201ENST00000418637 326 ntBASIC2.42□□□□□ -2.02
RTN3O95197 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.42□□□□□ -2.02
RTN3O95197 MTCO3P46-201ENST00000425787 232 ntBASIC2.42□□□□□ -2.02
RTN3O95197 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.42□□□□□ -2.02
RTN3O95197 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.42□□□□□ -2.02
RTN3O95197 RNU6-329P-201ENST00000459618 107 ntBASIC2.42□□□□□ -2.02
RTN3O95197 AC005741.1-201ENST00000511094 432 ntBASIC2.42□□□□□ -2.02
RTN3O95197 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.42□□□□□ -2.02
RTN3O95197 AC011712.1-201ENST00000588959 234 ntBASIC2.42□□□□□ -2.02
RTN3O95197 AC009994.1-201ENST00000606889 253 ntBASIC2.42□□□□□ -2.02
RTN3O95197 AC012640.5-201ENST00000623897 319 ntBASIC2.42□□□□□ -2.02
RTN3O95197 AP000553.5-201ENST00000641933 54 ntBASIC2.42□□□□□ -2.02
RTN3O95197 AC233981.2-201ENST00000611524 1614 ntBASIC2.42□□□□□ -2.02
RTN3O95197 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
RTN3O95197 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RTN3O95197 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RTN3O95197 AL357139.1-201ENST00000407792 426 ntBASIC2.41□□□□□ -2.02
RTN3O95197 RNA5SP494-201ENST00000410653 129 ntBASIC2.41□□□□□ -2.02
RTN3O95197 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.41□□□□□ -2.02
RTN3O95197 Z82205.1-201ENST00000428456 297 ntBASIC2.41□□□□□ -2.02
RTN3O95197 RPS15AP28-201ENST00000435088 386 ntBASIC2.41□□□□□ -2.02
RTN3O95197 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.41□□□□□ -2.02
RTN3O95197 MTND1P17-201ENST00000448961 204 ntBASIC2.41□□□□□ -2.02
RTN3O95197 MTCO2P30-201ENST00000503662 364 ntBASIC2.41□□□□□ -2.02
RTN3O95197 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.41□□□□□ -2.02
RTN3O95197 MIR449C-201ENST00000516047 92 ntBASIC2.41□□□□□ -2.02
RTN3O95197 SNORA31.25-201ENST00000517242 134 ntBASIC2.41□□□□□ -2.02
RTN3O95197 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.41□□□□□ -2.02
RTN3O95197 MRPS36P4-201ENST00000534436 298 ntBASIC2.41□□□□□ -2.02
RTN3O95197 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.41□□□□□ -2.02
RTN3O95197 AC026464.5-201ENST00000562497 722 ntBASIC2.41□□□□□ -2.02
RTN3O95197 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.41□□□□□ -2.02
RTN3O95197 MIR4742-201ENST00000581069 85 ntBASIC2.41□□□□□ -2.02
RTN3O95197 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.41□□□□□ -2.02
RTN3O95197 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms