Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 MIR502-201ENST00000606349 86 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 AC068944.2-201ENST00000610373 403 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 AC097520.1-201ENST00000624435 385 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
UPK3AO75631 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK3AO75631 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.47□□□□□ -2.17
UPK3AO75631 MTND4P23-201ENST00000447723 1363 ntBASIC1.47□□□□□ -2.17
UPK3AO75631 SNORD114-6-201ENST00000364393 72 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 SNORA36A-201ENST00000384221 132 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 RNU6-1106P-201ENST00000390845 107 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 Y_RNA.582-201ENST00000391023 95 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 SNORA26.3-201ENST00000391119 136 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 DEFB108C-201ENST00000400154 252 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.46□□□□□ -2.18
UPK3AO75631 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3AO75631 Y_RNA.638-201ENST00000459374 113 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 RNU7-138P-201ENST00000459479 64 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 AC130509.1-201ENST00000464158 433 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 HMGN1P13-201ENST00000505795 138 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 RPL39P5-202ENST00000512505 151 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 RNA5SP458-201ENST00000516188 119 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 RNU6-1038P-201ENST00000516516 104 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 Y_RNA.688-201ENST00000516565 95 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 SNORA31.17-201ENST00000516953 127 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3AO75631 SUB1P4-201ENST00000566062 339 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.46□□□□□ -2.18
UPK3AO75631 MIR4422-201ENST00000581938 83 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 MIR3611-201ENST00000584484 83 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3AO75631 VN1R80P-201ENST00000597126 338 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 Z98751.3-201ENST00000604447 521 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 AC009509.4-201ENST00000619202 509 ntBASIC1.46□□□□□ -2.18
UPK3AO75631 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK3AO75631 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
UPK3AO75631 Y_RNA.67-201ENST00000362870 100 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 RNU6-414P-201ENST00000363705 104 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 U3.9-201ENST00000363823 204 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 RNA5SP201-201ENST00000410316 124 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK3AO75631 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK3AO75631 AL357134.1-201ENST00000445848 426 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK3AO75631 snoU13.9-201ENST00000458927 103 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 AC087477.1-201ENST00000465747 340 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK3AO75631 RNA5SP401-201ENST00000515920 127 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 SNORA40.12-201ENST00000516329 111 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK3AO75631 MIR3683-201ENST00000580847 82 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 MIR4424-201ENST00000585257 86 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 AC087683.1-201ENST00000591187 441 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 AC139792.3-201ENST00000623525 224 ntBASIC1.45□□□□□ -2.18
UPK3AO75631 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK3AO75631 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
UPK3AO75631 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.45□□□□□ -2.18
UPK3AO75631 RNA5SP190-201ENST00000365222 118 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 RPS20P15-201ENST00000412792 311 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 EBAG9P1-201ENST00000418955 543 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 MTCO1P44-201ENST00000441935 243 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 MTCO2P3-201ENST00000442543 421 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 SNRPEP8-201ENST00000442866 260 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK3AO75631 TPTE2P5-203ENST00000458118 728 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 MTCO3P38-201ENST00000468910 766 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 AC010409.1-201ENST00000487382 476 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 AC091133.4-201ENST00000511142 308 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 SNORA14.1-201ENST00000516113 141 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 RNU6-189P-201ENST00000516120 101 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 RNU6-567P-201ENST00000516746 107 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 SUMO2P18-201ENST00000518873 252 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK3AO75631 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK3AO75631 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.44□□□□□ -2.18
UPK3AO75631 AC021231.3-201ENST00000558497 370 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK3AO75631 MTND1P15-201ENST00000579262 949 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 MIR4255-201ENST00000579351 72 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 AC010928.2-201ENST00000588017 287 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 AC010620.1-201ENST00000601088 1102 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 AC092747.3-201ENST00000603769 301 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 PCGEM1.1-201ENST00000613431 131 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 SNORA43.4-201ENST00000629559 138 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 AL450472.1-202ENST00000637286 180 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 AC006026.1-201ENST00000444025 1803 ntBASIC1.44□□□□□ -2.18
UPK3AO75631 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
UPK3AO75631 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
UPK3AO75631 Y_RNA.409-201ENST00000383990 98 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 RNU6-378P-201ENST00000384324 107 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 MIR208B-201ENST00000401172 77 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 RNU2-41P-201ENST00000410991 178 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 RN7SKP101-201ENST00000411376 320 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 AL663109.1-201ENST00000411498 844 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 AP000275.1-201ENST00000411943 390 ntBASIC1.43□□□□□ -2.18
UPK3AO75631 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3AO75631 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
UPK3AO75631 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK3AO75631 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK3AO75631 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK3AO75631 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms