Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.29□□□□□ -2.46
USH2AO75445 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
USH2AO75445 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.29□□□□□ -2.46
USH2AO75445 AP005229.2-201ENST00000609980 697 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
USH2AO75445 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.29□□□□□ -2.46
USH2AO75445 RNU6-848P-201ENST00000515948 107 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 RNU6-617P-201ENST00000516147 107 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 RNU6-473P-201ENST00000516164 107 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AL049870.4-201ENST00000555741 486 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 SNORA77B-201ENST00000578179 125 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AC090186.1-201ENST00000605991 572 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 MIR103A2-201ENST00000362154 78 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 MIR507-201ENST00000385234 94 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.3□□□□□ -2.46
USH2AO75445 MTND1P28-201ENST00000435623 950 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC092427.1-201ENST00000439177 601 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 RNU7-157P-201ENST00000459600 66 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC-0.3□□□□□ -2.46
USH2AO75445 AC109445.1-201ENST00000512356 383 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 MTCYBP43-201ENST00000513621 740 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC-0.3□□□□□ -2.46
USH2AO75445 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.3□□□□□ -2.46
USH2AO75445 AK6P2-201ENST00000549020 471 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AL031176.1-201ENST00000604554 466 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 MIR6502-201ENST00000617296 76 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC073968.1-201ENST00000618594 637 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC104985.3-201ENST00000623479 597 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
USH2AO75445 MIR18A-201ENST00000362310 71 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 SNORD115-3-201ENST00000363100 82 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 SNORD116-13-201ENST00000384408 92 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 RNU6-910P-201ENST00000390844 107 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC-0.3□□□□□ -2.46
USH2AO75445 AL365184.2-201ENST00000431139 435 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 CECR9-201ENST00000453421 199 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.3□□□□□ -2.46
USH2AO75445 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.3□□□□□ -2.46
USH2AO75445 AC011979.2-201ENST00000527568 352 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC007349.4-201ENST00000608114 532 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.3□□□□□ -2.46
USH2AO75445 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
USH2AO75445 RNA5SP405-201ENST00000363059 114 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 SNORD115-28-201ENST00000363931 81 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 RNU6-1151P-201ENST00000384684 107 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AL353813.1-201ENST00000440700 253 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC079354.2-201ENST00000453523 154 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.3□□□□□ -2.46
USH2AO75445 RNU1-117P-201ENST00000517041 158 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 MIR5094-201ENST00000578766 85 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC008993.2-201ENST00000631744 806 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
USH2AO75445 AC123900.1-201ENST00000420390 96 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC002429.1-201ENST00000437672 148 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AL031313.1-201ENST00000448435 256 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 SNORA13-201ENST00000458790 133 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC130509.1-201ENST00000464158 433 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC010460.2-201ENST00000509054 677 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 RNU6-479P-201ENST00000516348 105 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.3□□□□□ -2.46
USH2AO75445 AP000763.2-201ENST00000540641 163 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AC233702.2-202ENST00000562547 291 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.3□□□□□ -2.46
USH2AO75445 AC245008.1-201ENST00000608123 476 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.3□□□□□ -2.46
USH2AO75445 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
USH2AO75445 RNU4-21P-201ENST00000362802 126 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.31□□□□□ -2.46
USH2AO75445 MTND1P15-201ENST00000579262 949 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 SNORD115-27-201ENST00000364430 82 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 MIR29C-201ENST00000385231 88 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 MIR454-201ENST00000390180 115 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AC119751.3-201ENST00000399720 670 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 MIR548H1-201ENST00000408610 102 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.31□□□□□ -2.46
USH2AO75445 RNU6-964P-201ENST00000516524 69 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 DEFB130C-202ENST00000530001 230 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AP003168.1-201ENST00000530091 307 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.31□□□□□ -2.46
USH2AO75445 AL355810.1-201ENST00000614629 552 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 RNU6-169P-201ENST00000365336 107 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 Y_RNA.502-201ENST00000384478 113 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AC010385.1-201ENST00000412374 256 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AC024082.2-201ENST00000434771 238 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AP002371.1-201ENST00000463604 433 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 MIR4520-1-201ENST00000582609 70 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AP002906.1-201ENST00000603405 233 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 MTND5P31-201ENST00000419366 1374 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.31□□□□□ -2.46
USH2AO75445 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.31□□□□□ -2.46
USH2AO75445 ELOCP30-201ENST00000447108 299 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.31□□□□□ -2.46
USH2AO75445 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms