Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 RNU6-759P-201ENST00000516740 103 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.23□□□□□ -2.21
NPHP4O75161 AP003072.2-201ENST00000527756 676 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.23□□□□□ -2.21
NPHP4O75161 AC234772.3-201ENST00000602277 528 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 PRR13P7-201ENST00000605538 430 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 MIR8087-201ENST00000612745 78 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AC008250.2-201ENST00000615261 205 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 AC068787.1-201ENST00000623908 691 ntBASIC1.23□□□□□ -2.21
NPHP4O75161 MTND4P4-201ENST00000439033 1366 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 LINC02555-201ENST00000563933 1951 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 CBX3P1-201ENST00000325243 554 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.22□□□□□ -2.21
NPHP4O75161 RNU6-716P-201ENST00000365621 103 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 RNU6-43P-201ENST00000384302 107 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
NPHP4O75161 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
NPHP4O75161 RNA5SP193-201ENST00000410353 107 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 RNU6-387P-201ENST00000411331 105 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.22□□□□□ -2.21
NPHP4O75161 NCOR1P3-201ENST00000420479 303 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.22□□□□□ -2.21
NPHP4O75161 AC010099.3-201ENST00000423896 409 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.22□□□□□ -2.21
NPHP4O75161 SNRPEP8-201ENST00000442866 260 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 AC109446.1-201ENST00000566172 220 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.22□□□□□ -2.21
NPHP4O75161 MIR5094-201ENST00000578766 85 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.22□□□□□ -2.21
NPHP4O75161 Z84480.1-201ENST00000605131 311 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 AC018889.1-201ENST00000605372 397 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.22□□□□□ -2.21
NPHP4O75161 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.22□□□□□ -2.21
NPHP4O75161 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
NPHP4O75161 AC099842.1-201ENST00000619919 596 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 AC091925.1-201ENST00000623204 462 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 AC008993.2-201ENST00000631744 806 ntBASIC1.22□□□□□ -2.21
NPHP4O75161 ZNF680P1-201ENST00000436625 1469 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 RNU6-336P-201ENST00000364891 107 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 AL357139.1-201ENST00000407792 426 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 RNU6-1245P-201ENST00000411130 106 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 AC010975.2-201ENST00000427781 588 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 RPL31P35-201ENST00000431058 377 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.21□□□□□ -2.22
NPHP4O75161 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
NPHP4O75161 AL133217.1-201ENST00000450980 425 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 RPS29P15-201ENST00000458329 171 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 AC104136.1-201ENST00000512969 394 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 RNU6-1129P-201ENST00000515964 104 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 RNU6-415P-201ENST00000516252 97 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 AC133485.1-201ENST00000567176 124 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 AC138907.6-201ENST00000568401 126 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 AC002400.1-201ENST00000569310 726 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 AC090616.2-202ENST00000584248 222 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
NPHP4O75161 AC138649.3-201ENST00000622154 254 ntBASIC1.21□□□□□ -2.22
NPHP4O75161 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
NPHP4O75161 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
NPHP4O75161 MIR340-201ENST00000362125 95 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 RNU6-26P-201ENST00000383985 107 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 RNU6-74P-201ENST00000384235 107 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 Y_RNA.458-201ENST00000384240 102 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 SNORA12.2-201ENST00000391040 156 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AL590135.1-201ENST00000422215 156 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AC019205.3-201ENST00000424573 156 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.2□□□□□ -2.22
NPHP4O75161 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.2□□□□□ -2.22
NPHP4O75161 MTND1P30-201ENST00000441241 901 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AL022238.1-201ENST00000442557 355 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AC016700.2-201ENST00000446011 156 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AC015911.1-201ENST00000495111 156 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.2□□□□□ -2.22
NPHP4O75161 AC097473.1-201ENST00000508142 408 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 MTCO3P7-201ENST00000510008 774 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.2□□□□□ -2.22
NPHP4O75161 MTCO3P28-201ENST00000513351 515 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 SNORA44.1-201ENST00000517031 108 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.2□□□□□ -2.22
NPHP4O75161 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.2□□□□□ -2.22
NPHP4O75161 ZNF321P-202ENST00000550843 495 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 MIR3198-2-201ENST00000577868 80 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.2□□□□□ -2.22
NPHP4O75161 MIR4775-201ENST00000581168 75 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AC008752.3-201ENST00000588113 712 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AC012507.3-201ENST00000603556 477 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AP001485.1-201ENST00000604799 199 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AC103810.9-201ENST00000606688 112 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 AL603839.4-201ENST00000624658 1005 ntBASIC1.2□□□□□ -2.22
NPHP4O75161 MTND5P17-201ENST00000418405 1603 ntBASIC1.19□□□□□ -2.22
NPHP4O75161 AL589743.1-201ENST00000551932 2712 ntBASIC1.19□□□□□ -2.22
NPHP4O75161 Y_RNA.332-201ENST00000365271 113 ntBASIC1.19□□□□□ -2.22
NPHP4O75161 RNU6-1029P-201ENST00000384109 107 ntBASIC1.19□□□□□ -2.22
NPHP4O75161 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.19□□□□□ -2.22
NPHP4O75161 MTND4P20-201ENST00000424125 869 ntBASIC1.19□□□□□ -2.22
NPHP4O75161 AC139712.2-201ENST00000424302 339 ntBASIC1.19□□□□□ -2.22
NPHP4O75161 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.19□□□□□ -2.22
NPHP4O75161 RNU6-333P-201ENST00000459117 107 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms