Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RPS15AP10-201ENST00000432472 382 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.36□□□□□ -2.03
CACNA1FO60840 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.36□□□□□ -2.03
CACNA1FO60840 RNU6-635P-201ENST00000516651 102 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 RNU6-988P-201ENST00000519081 107 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 AC113195.1-201ENST00000579952 141 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 OR1M4P-201ENST00000589199 287 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 AC016727.2-201ENST00000603988 621 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 Z69720.2-201ENST00000624755 279 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 AL606534.2-204ENST00000635008 178 ntBASIC2.36□□□□□ -2.03
CACNA1FO60840 Y_RNA.158-201ENST00000363651 101 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CACNA1FO60840 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CACNA1FO60840 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.35□□□□□ -2.03
CACNA1FO60840 AL353997.1-201ENST00000432936 108 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 AL645568.3-201ENST00000433683 316 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 HMGN2P23-201ENST00000456759 269 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 RPL9P9-202ENST00000466501 579 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 AL135752.1-201ENST00000479477 471 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 AL160314.1-201ENST00000490836 438 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.35□□□□□ -2.03
CACNA1FO60840 RNU1-86P-201ENST00000516108 154 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 SCARNA15.2-201ENST00000516409 127 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 RNU1-107P-201ENST00000516617 154 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 SNORA31.19-201ENST00000517079 126 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.35□□□□□ -2.03
CACNA1FO60840 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.35□□□□□ -2.03
CACNA1FO60840 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.35□□□□□ -2.03
CACNA1FO60840 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 SNRPGP19-201ENST00000603826 189 ntBASIC2.35□□□□□ -2.03
CACNA1FO60840 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.35□□□□□ -2.03
CACNA1FO60840 Y_RNA.47-201ENST00000362697 108 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 RNU1-105P-201ENST00000363470 161 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 Y_RNA.314-201ENST00000365114 102 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 RNU5E-7P-201ENST00000365290 117 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 RNU6-1329P-201ENST00000365664 107 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 RNU6-166P-201ENST00000384371 107 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 Y_RNA.533-201ENST00000384596 114 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 MIR325-201ENST00000385260 98 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 SNORA17.3-201ENST00000391159 129 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 AL591034.2-201ENST00000402839 359 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 Y_RNA.623-201ENST00000411128 95 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.34□□□□□ -2.03
CACNA1FO60840 AC092573.2-201ENST00000434546 243 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 AC099799.1-201ENST00000439809 192 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.34□□□□□ -2.03
CACNA1FO60840 AL021397.1-201ENST00000451806 248 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 RNU6-1037P-201ENST00000459571 107 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.34□□□□□ -2.03
CACNA1FO60840 RNU6-976P-201ENST00000516086 111 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 RNU6-911P-201ENST00000516523 104 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 RNU6-572P-201ENST00000516724 80 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.34□□□□□ -2.03
CACNA1FO60840 AL161670.1-201ENST00000554348 137 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 SUB1P3-201ENST00000564581 315 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 AC123912.5-201ENST00000605470 343 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 HMGB1P24-202ENST00000615653 685 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 RMST_4.1-201ENST00000616886 107 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.34□□□□□ -2.03
CACNA1FO60840 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.34□□□□□ -2.03
CACNA1FO60840 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CACNA1FO60840 RNU6-190P-201ENST00000384154 102 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 RNU6-45P-201ENST00000384471 107 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 RNU6-790P-201ENST00000384479 105 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 MIR583-201ENST00000384846 75 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 MIR767-201ENST00000390228 109 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 RNA5SP252-201ENST00000391131 119 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 MIR1294-201ENST00000408503 142 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.34□□□□□ -2.04
CACNA1FO60840 EIF1AXP1-201ENST00000419267 435 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 AC007098.1-201ENST00000420122 367 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 PGBD4P6-201ENST00000421501 610 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 AC018865.2-201ENST00000423631 129 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 UBE2V1P4-201ENST00000425374 344 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.34□□□□□ -2.04
CACNA1FO60840 AC007919.1-201ENST00000429380 217 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 WARS2P1-201ENST00000429678 537 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 Z82210.1-201ENST00000440037 231 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 RPL23AP42-201ENST00000471152 471 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 FO393415.2-201ENST00000480085 343 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 RNU6-120P-201ENST00000516077 103 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CACNA1FO60840 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.34□□□□□ -2.04
CACNA1FO60840 AC009902.1-201ENST00000519351 183 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.34□□□□□ -2.04
CACNA1FO60840 TRAV32-201ENST00000553993 340 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 AC103996.1-201ENST00000555468 102 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 MIR548AC-201ENST00000585049 88 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 AC027309.3-201ENST00000623419 351 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 AC002064.3-201ENST00000623448 346 ntBASIC2.34□□□□□ -2.04
CACNA1FO60840 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
CACNA1FO60840 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA1FO60840 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA1FO60840 MIR625-201ENST00000385047 85 ntBASIC2.33□□□□□ -2.04
CACNA1FO60840 RNU6-482P-201ENST00000391068 107 ntBASIC2.33□□□□□ -2.04
CACNA1FO60840 CYCSP33-201ENST00000414485 327 ntBASIC2.33□□□□□ -2.04
CACNA1FO60840 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.33□□□□□ -2.04
CACNA1FO60840 AC018437.1-201ENST00000492214 406 ntBASIC2.33□□□□□ -2.04
CACNA1FO60840 ACA59.1-201ENST00000515966 143 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms