Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.89□□□□□ -1.95
SNX2O60749 RNU6-988P-201ENST00000519081 107 ntBASIC2.89□□□□□ -1.95
SNX2O60749 AC004584.2-201ENST00000570407 410 ntBASIC2.89□□□□□ -1.95
SNX2O60749 AC083806.3-201ENST00000614016 455 ntBASIC2.89□□□□□ -1.95
SNX2O60749 AC087588.2-201ENST00000617667 426 ntBASIC2.89□□□□□ -1.95
SNX2O60749 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
SNX2O60749 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SNX2O60749 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SNX2O60749 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNX2O60749 ZNF72P-201ENST00000425869 1908 ntBASIC2.88□□□□□ -1.95
SNX2O60749 SNORA9.2-201ENST00000365361 133 ntBASIC2.88□□□□□ -1.95
SNX2O60749 RNU6-1032P-201ENST00000384100 107 ntBASIC2.88□□□□□ -1.95
SNX2O60749 MIR186-201ENST00000384988 86 ntBASIC2.88□□□□□ -1.95
SNX2O60749 MIR487A-201ENST00000385009 80 ntBASIC2.88□□□□□ -1.95
SNX2O60749 MIR634-201ENST00000385208 97 ntBASIC2.88□□□□□ -1.95
SNX2O60749 SNORA26.3-201ENST00000391119 136 ntBASIC2.88□□□□□ -1.95
SNX2O60749 CYCSP48-201ENST00000417124 323 ntBASIC2.88□□□□□ -1.95
SNX2O60749 AL590135.1-201ENST00000422215 156 ntBASIC2.88□□□□□ -1.95
SNX2O60749 AC019205.3-201ENST00000424573 156 ntBASIC2.88□□□□□ -1.95
SNX2O60749 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.88□□□□□ -1.95
SNX2O60749 AC099799.1-201ENST00000439809 192 ntBASIC2.88□□□□□ -1.95
SNX2O60749 AC016700.2-201ENST00000446011 156 ntBASIC2.88□□□□□ -1.95
SNX2O60749 TOMM22P6-201ENST00000465035 409 ntBASIC2.88□□□□□ -1.95
SNX2O60749 AC015911.1-201ENST00000495111 156 ntBASIC2.88□□□□□ -1.95
SNX2O60749 CKS1BP2-201ENST00000497342 240 ntBASIC2.88□□□□□ -1.95
SNX2O60749 AC083906.5-201ENST00000503722 328 ntBASIC2.88□□□□□ -1.95
SNX2O60749 AC021146.2-201ENST00000504736 556 ntBASIC2.88□□□□□ -1.95
SNX2O60749 RNU5F-2P-201ENST00000516066 82 ntBASIC2.88□□□□□ -1.95
SNX2O60749 RNU4-77P-201ENST00000516692 156 ntBASIC2.88□□□□□ -1.95
SNX2O60749 RNU6-1137P-201ENST00000517073 99 ntBASIC2.88□□□□□ -1.95
SNX2O60749 MIR4658-201ENST00000584344 65 ntBASIC2.88□□□□□ -1.95
SNX2O60749 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.88□□□□□ -1.95
SNX2O60749 MIR7106-201ENST00000612419 65 ntBASIC2.88□□□□□ -1.95
SNX2O60749 U4atac.1-201ENST00000618345 95 ntBASIC2.88□□□□□ -1.95
SNX2O60749 SCARNA4-201ENST00000629045 128 ntBASIC2.88□□□□□ -1.95
SNX2O60749 AL035425.3-201ENST00000564206 4996 ntBASIC2.88□□□□□ -1.95
SNX2O60749 RNU4-9P-201ENST00000364951 139 ntBASIC2.87□□□□□ -1.95
SNX2O60749 RNU6-142P-201ENST00000384019 107 ntBASIC2.87□□□□□ -1.95
SNX2O60749 RNU6-700P-201ENST00000391043 107 ntBASIC2.87□□□□□ -1.95
SNX2O60749 AL451074.5-201ENST00000415894 435 ntBASIC2.87□□□□□ -1.95
SNX2O60749 MTCYBP10-201ENST00000424905 650 ntBASIC2.87□□□□□ -1.95
SNX2O60749 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.87□□□□□ -1.95
SNX2O60749 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
SNX2O60749 RN7SKP210-201ENST00000459176 261 ntBASIC2.87□□□□□ -1.95
SNX2O60749 AC087477.1-201ENST00000465747 340 ntBASIC2.87□□□□□ -1.95
SNX2O60749 RNU6-826P-201ENST00000516827 104 ntBASIC2.87□□□□□ -1.95
SNX2O60749 AC104581.2-201ENST00000572227 430 ntBASIC2.87□□□□□ -1.95
SNX2O60749 AC073410.2-201ENST00000603240 332 ntBASIC2.87□□□□□ -1.95
SNX2O60749 SNORD58B-201ENST00000607313 66 ntBASIC2.87□□□□□ -1.95
SNX2O60749 AL355802.3-201ENST00000607571 545 ntBASIC2.87□□□□□ -1.95
SNX2O60749 AC138305.3-201ENST00000624988 240 ntBASIC2.87□□□□□ -1.95
SNX2O60749 SCARNA15.3-201ENST00000626315 122 ntBASIC2.87□□□□□ -1.95
SNX2O60749 SCARNA4.1-201ENST00000628597 123 ntBASIC2.87□□□□□ -1.95
SNX2O60749 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNX2O60749 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNX2O60749 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SNX2O60749 AC092268.1-201ENST00000342691 405 ntBASIC2.86□□□□□ -1.95
SNX2O60749 Y_RNA.162-201ENST00000363683 102 ntBASIC2.86□□□□□ -1.95
SNX2O60749 SNORA80A-201ENST00000363922 136 ntBASIC2.86□□□□□ -1.95
SNX2O60749 SNORA63C-201ENST00000364578 129 ntBASIC2.86□□□□□ -1.95
SNX2O60749 RNU4-42P-201ENST00000364738 142 ntBASIC2.86□□□□□ -1.95
SNX2O60749 RNA5SP125-201ENST00000364843 120 ntBASIC2.86□□□□□ -1.95
SNX2O60749 RNU1-115P-201ENST00000365329 160 ntBASIC2.86□□□□□ -1.95
SNX2O60749 Y_RNA.364-201ENST00000365532 101 ntBASIC2.86□□□□□ -1.95
SNX2O60749 RNU1-57P-201ENST00000384491 166 ntBASIC2.86□□□□□ -1.95
SNX2O60749 MIR606-201ENST00000384851 96 ntBASIC2.86□□□□□ -1.95
SNX2O60749 MIR190B-201ENST00000401119 79 ntBASIC2.86□□□□□ -1.95
SNX2O60749 AC007064.1-201ENST00000412238 351 ntBASIC2.86□□□□□ -1.95
SNX2O60749 EIF4EP4-201ENST00000424916 578 ntBASIC2.86□□□□□ -1.95
SNX2O60749 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX2O60749 AL353752.1-201ENST00000454946 260 ntBASIC2.86□□□□□ -1.95
SNX2O60749 snoU13.30-201ENST00000458951 104 ntBASIC2.86□□□□□ -1.95
SNX2O60749 snoU13.14-201ENST00000459372 104 ntBASIC2.86□□□□□ -1.95
SNX2O60749 RNU7-169P-201ENST00000459456 61 ntBASIC2.86□□□□□ -1.95
SNX2O60749 RPS27AP9-201ENST00000477681 438 ntBASIC2.86□□□□□ -1.95
SNX2O60749 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.86□□□□□ -1.95
SNX2O60749 RNU7-175P-201ENST00000515915 61 ntBASIC2.86□□□□□ -1.95
SNX2O60749 RNA5SP76-201ENST00000516277 87 ntBASIC2.86□□□□□ -1.95
SNX2O60749 SCARNA13-201ENST00000516672 275 ntBASIC2.86□□□□□ -1.95
SNX2O60749 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.86□□□□□ -1.95
SNX2O60749 AL360085.1-201ENST00000604713 532 ntBASIC2.86□□□□□ -1.95
SNX2O60749 AL138963.2-201ENST00000605137 226 ntBASIC2.86□□□□□ -1.95
SNX2O60749 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.86□□□□□ -1.95
SNX2O60749 SNORD98-201ENST00000636377 67 ntBASIC2.86□□□□□ -1.95
SNX2O60749 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.86□□□□□ -1.95
SNX2O60749 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNX2O60749 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SNX2O60749 AP000560.1-201ENST00000624150 1937 ntBASIC2.85□□□□□ -1.95
SNX2O60749 RNU1-35P-201ENST00000362782 153 ntBASIC2.85□□□□□ -1.95
SNX2O60749 MIR32-201ENST00000384965 70 ntBASIC2.85□□□□□ -1.95
SNX2O60749 AC007098.1-201ENST00000420122 367 ntBASIC2.85□□□□□ -1.95
SNX2O60749 AL139132.1-201ENST00000431587 344 ntBASIC2.85□□□□□ -1.95
SNX2O60749 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.85□□□□□ -1.95
SNX2O60749 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX2O60749 AL121594.1-201ENST00000475906 575 ntBASIC2.85□□□□□ -1.95
SNX2O60749 HMGB1P35-201ENST00000503360 598 ntBASIC2.85□□□□□ -1.95
SNX2O60749 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.85□□□□□ -1.95
SNX2O60749 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.85□□□□□ -1.95
SNX2O60749 AC115990.1-201ENST00000526957 301 ntBASIC2.85□□□□□ -1.95
SNX2O60749 AC016256.1-201ENST00000547971 354 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms