Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 RNU4-56P-201ENST00000364700 142 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 RNU6-296P-201ENST00000384608 107 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 MIR520A-201ENST00000384862 85 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 RPS29P13-201ENST00000402041 169 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 RPL21P111-201ENST00000418453 477 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 AC078809.1-201ENST00000427601 140 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.39□□□□□ -2.19
KLHL41O60662 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.39□□□□□ -2.19
KLHL41O60662 AL031274.1-201ENST00000450334 232 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.39□□□□□ -2.19
KLHL41O60662 SCARNA18-201ENST00000459004 134 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.39□□□□□ -2.19
KLHL41O60662 AC097473.1-201ENST00000508142 408 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.39□□□□□ -2.19
KLHL41O60662 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.39□□□□□ -2.19
KLHL41O60662 AP002963.1-201ENST00000530590 184 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 RRN3P3-201ENST00000549207 578 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 HSPE1P4-201ENST00000550617 308 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.39□□□□□ -2.19
KLHL41O60662 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.39□□□□□ -2.19
KLHL41O60662 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.39□□□□□ -2.19
KLHL41O60662 AC109446.1-201ENST00000566172 220 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 VN1R107P-201ENST00000601784 209 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 AC120349.3-201ENST00000624377 529 ntBASIC1.39□□□□□ -2.19
KLHL41O60662 AC245060.5-201ENST00000610778 3293 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 U8.1-201ENST00000362843 134 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 SNORD32A-201ENST00000364805 84 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 RNU6-606P-201ENST00000384721 111 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 MTCYBP2-201ENST00000407745 171 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 RN7SKP61-201ENST00000410642 295 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 AL117339.3-201ENST00000418733 162 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.38□□□□□ -2.19
KLHL41O60662 AC027119.1-201ENST00000440877 241 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.38□□□□□ -2.19
KLHL41O60662 AC244505.5-201ENST00000443639 207 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 RPS27AP8-201ENST00000452665 445 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 GMFBP1-201ENST00000467831 427 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 AC079140.2-201ENST00000506193 142 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 AC079140.5-201ENST00000507882 310 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 AK3P2-201ENST00000507976 429 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 AC103996.1-201ENST00000555468 102 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 AC015720.1-201ENST00000565251 277 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 MIR3923-201ENST00000579521 83 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 RSL24D1P11-201ENST00000591045 491 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 Z94722.1-201ENST00000604328 474 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KLHL41O60662 AL157834.3-201ENST00000615543 103 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 AC022513.1-201ENST00000624512 117 ntBASIC1.38□□□□□ -2.19
KLHL41O60662 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.38□□□□□ -2.19
KLHL41O60662 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 SNORD1A-201ENST00000364968 72 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 RNU6-827P-201ENST00000365553 106 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 RNU2-9P-201ENST00000410194 145 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 RNU6-174P-201ENST00000410406 106 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.37□□□□□ -2.19
KLHL41O60662 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.37□□□□□ -2.19
KLHL41O60662 SNAP23P1-201ENST00000433229 246 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 TOMM22P6-201ENST00000465035 409 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 RNA5SP481-201ENST00000516814 122 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.37□□□□□ -2.19
KLHL41O60662 LRRC34P1-201ENST00000542742 915 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.37□□□□□ -2.19
KLHL41O60662 AGGF1P4-201ENST00000568249 801 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 MIR3913-1-201ENST00000577744 102 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 AC012507.3-201ENST00000603556 477 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 AL645939.4-201ENST00000604495 135 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 AC069114.2-201ENST00000604699 304 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 AL356157.2-201ENST00000605122 111 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 MIR8070-201ENST00000616510 88 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.37□□□□□ -2.19
KLHL41O60662 AL390237.1-201ENST00000404226 1415 ntBASIC1.37□□□□□ -2.19
KLHL41O60662 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.36□□□□□ -2.19
KLHL41O60662 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KLHL41O60662 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KLHL41O60662 Y_RNA.169-201ENST00000363745 96 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 RNU6-266P-201ENST00000364225 107 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 MIR618-201ENST00000385287 98 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 RNU2-29P-201ENST00000410423 189 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.36□□□□□ -2.19
KLHL41O60662 MTCO3P41-201ENST00000414801 328 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 MTCO2P34-201ENST00000421994 607 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 C8orf59P1-201ENST00000429930 303 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 SNRPEP8-201ENST00000442866 260 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.36□□□□□ -2.19
KLHL41O60662 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.36□□□□□ -2.19
KLHL41O60662 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.36□□□□□ -2.19
KLHL41O60662 SUB1P2-201ENST00000556401 297 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 MTCO3P23-201ENST00000561363 289 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 HMGB1P33-201ENST00000563485 527 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.36□□□□□ -2.19
KLHL41O60662 AC025449.1-201ENST00000603896 529 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 AL353770.2-201ENST00000620024 78 ntBASIC1.36□□□□□ -2.19
KLHL41O60662 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.36□□□□□ -2.19
KLHL41O60662 AC092268.1-201ENST00000342691 405 ntBASIC1.35□□□□□ -2.19
KLHL41O60662 RNU6-1065P-201ENST00000384513 106 ntBASIC1.35□□□□□ -2.19
KLHL41O60662 RNA5SP201-201ENST00000410316 124 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms