Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC079781.2-201ENST00000446424 169 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 MTND1P18-201ENST00000448191 573 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 AC007547.1-201ENST00000462177 490 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
KDELR3O43731 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.01□□□□□ -2.25
KDELR3O43731 RNU6-1041P-201ENST00000516254 102 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 ELOCP32-201ENST00000548625 324 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.01□□□□□ -2.25
KDELR3O43731 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.01□□□□□ -2.25
KDELR3O43731 TMF1P1-201ENST00000576058 373 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 MIR4709-201ENST00000577272 72 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.01□□□□□ -2.25
KDELR3O43731 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.01□□□□□ -2.25
KDELR3O43731 HSPE1P19-201ENST00000603327 295 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 Z98751.3-201ENST00000604447 521 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 AC004492.1-201ENST00000607036 742 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 AL353149.1-201ENST00000610667 244 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 AC007671.2-201ENST00000637344 619 ntBASIC1.01□□□□□ -2.25
KDELR3O43731 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
KDELR3O43731 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KDELR3O43731 RNU6-877P-201ENST00000383868 107 ntBASIC1□□□□□ -2.25
KDELR3O43731 MIR194-1-201ENST00000384892 85 ntBASIC1□□□□□ -2.25
KDELR3O43731 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1□□□□□ -2.25
KDELR3O43731 MIR208B-201ENST00000401172 77 ntBASIC1□□□□□ -2.25
KDELR3O43731 MIR1276-201ENST00000408707 83 ntBASIC1□□□□□ -2.25
KDELR3O43731 SNAP23P1-201ENST00000433229 246 ntBASIC1□□□□□ -2.25
KDELR3O43731 AC073614.1-201ENST00000438690 650 ntBASIC1□□□□□ -2.25
KDELR3O43731 AL163973.1-201ENST00000484753 577 ntBASIC1□□□□□ -2.25
KDELR3O43731 ARL2BPP4-201ENST00000506854 471 ntBASIC1□□□□□ -2.25
KDELR3O43731 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1□□□□□ -2.25
KDELR3O43731 RNU2-34P-201ENST00000516534 121 ntBASIC1□□□□□ -2.25
KDELR3O43731 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
KDELR3O43731 RNU6-1220P-201ENST00000517126 108 ntBASIC1□□□□□ -2.25
KDELR3O43731 AP003461.1-201ENST00000528866 78 ntBASIC1□□□□□ -2.25
KDELR3O43731 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1□□□□□ -2.25
KDELR3O43731 MZT1P2-201ENST00000604387 248 ntBASIC1□□□□□ -2.25
KDELR3O43731 AC064807.4-201ENST00000607201 407 ntBASIC1□□□□□ -2.25
KDELR3O43731 AL365434.2-201ENST00000607979 234 ntBASIC1□□□□□ -2.25
KDELR3O43731 AC008250.2-201ENST00000615261 205 ntBASIC1□□□□□ -2.25
KDELR3O43731 MIR8070-201ENST00000616510 88 ntBASIC1□□□□□ -2.25
KDELR3O43731 AC012676.2-201ENST00000619258 186 ntBASIC1□□□□□ -2.25
KDELR3O43731 AL078595.3-201ENST00000623815 1166 ntBASIC1□□□□□ -2.25
KDELR3O43731 AL359697.1-201ENST00000624879 587 ntBASIC1□□□□□ -2.25
KDELR3O43731 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KDELR3O43731 MIR96-201ENST00000362288 78 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 SNORD114-27-201ENST00000363766 70 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 RNU6-169P-201ENST00000365336 107 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 SNORA22-201ENST00000383907 134 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 RNU6-968P-201ENST00000384076 107 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 RNU6-378P-201ENST00000384324 107 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 Y_RNA.504-201ENST00000384481 104 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 SNORA22C-201ENST00000384614 134 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
KDELR3O43731 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
KDELR3O43731 RNU4-46P-201ENST00000410818 138 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 AL354692.1-201ENST00000423044 315 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 USP9YP28-201ENST00000435142 589 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.99□□□□□ -2.25
KDELR3O43731 EPS15P1-201ENST00000448836 336 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.99□□□□□ -2.25
KDELR3O43731 AC114982.1-201ENST00000469402 321 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.99□□□□□ -2.25
KDELR3O43731 AK3P2-201ENST00000507976 429 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 MTCO3P7-201ENST00000510008 774 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KDELR3O43731 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.99□□□□□ -2.25
KDELR3O43731 AL391646.1-201ENST00000603860 190 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 AC008147.4-201ENST00000617570 1204 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 AC011155.2-201ENST00000623202 216 ntBASIC0.99□□□□□ -2.25
KDELR3O43731 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
KDELR3O43731 Y_RNA.367-201ENST00000365544 101 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 MIR300-201ENST00000401138 83 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 Y_RNA.598-201ENST00000410480 95 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 AL117339.3-201ENST00000418733 162 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 GTF2IP13-201ENST00000438487 386 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.98□□□□□ -2.25
KDELR3O43731 AL031274.1-201ENST00000450334 232 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.98□□□□□ -2.25
KDELR3O43731 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.98□□□□□ -2.25
KDELR3O43731 LRRC34P2-201ENST00000514850 553 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 RNA5SP503-201ENST00000517047 117 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 AC009994.1-201ENST00000606889 253 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 AL391834.2-201ENST00000609982 546 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 AC091304.9-201ENST00000612091 226 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 AC005520.5-201ENST00000613926 164 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 uc_338.11-201ENST00000619132 160 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 AC136475.10-201ENST00000620253 385 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 AC022418.1-201ENST00000624118 445 ntBASIC0.98□□□□□ -2.25
KDELR3O43731 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
KDELR3O43731 RNU6-1303P-201ENST00000364841 107 ntBASIC0.97□□□□□ -2.25
KDELR3O43731 RNU6-925P-201ENST00000384629 104 ntBASIC0.97□□□□□ -2.25
KDELR3O43731 MIR515-2-201ENST00000384883 83 ntBASIC0.97□□□□□ -2.25
KDELR3O43731 MIR515-1-201ENST00000384884 83 ntBASIC0.97□□□□□ -2.25
KDELR3O43731 MIR222-201ENST00000384992 110 ntBASIC0.97□□□□□ -2.25
KDELR3O43731 AL117342.1-201ENST00000404861 406 ntBASIC0.97□□□□□ -2.25
KDELR3O43731 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.97□□□□□ -2.25
KDELR3O43731 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms