Protein–RNA interactions for Protein: O43186

CRX, Cone-rod homeobox protein, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRXO43186 AL157834.3-201ENST00000615543 103 ntBASIC0.85□□□□□ -2.27
CRXO43186 AL450472.1-202ENST00000637286 180 ntBASIC0.85□□□□□ -2.27
CRXO43186 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CRXO43186 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CRXO43186 RNU6-827P-201ENST00000365553 106 ntBASIC0.84□□□□□ -2.27
CRXO43186 SNORA18.2-201ENST00000383865 132 ntBASIC0.84□□□□□ -2.27
CRXO43186 RPS29P13-201ENST00000402041 169 ntBASIC0.84□□□□□ -2.27
CRXO43186 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.84□□□□□ -2.27
CRXO43186 ZNF114P1-201ENST00000453500 292 ntBASIC0.84□□□□□ -2.27
CRXO43186 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.84□□□□□ -2.27
CRXO43186 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.84□□□□□ -2.27
CRXO43186 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.84□□□□□ -2.27
CRXO43186 RNU6-856P-201ENST00000516959 98 ntBASIC0.84□□□□□ -2.27
CRXO43186 AC090572.1-201ENST00000519251 160 ntBASIC0.84□□□□□ -2.27
CRXO43186 SUMO2P16-201ENST00000519475 264 ntBASIC0.84□□□□□ -2.27
CRXO43186 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.84□□□□□ -2.27
CRXO43186 NIFKP6-201ENST00000598115 845 ntBASIC0.84□□□□□ -2.27
CRXO43186 RPL17P51-201ENST00000605218 238 ntBASIC0.84□□□□□ -2.27
CRXO43186 AP000240.1-201ENST00000609910 452 ntBASIC0.84□□□□□ -2.27
CRXO43186 AC027335.2-201ENST00000624030 375 ntBASIC0.84□□□□□ -2.27
CRXO43186 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.84□□□□□ -2.27
CRXO43186 Y_RNA.367-201ENST00000365544 101 ntBASIC0.83□□□□□ -2.28
CRXO43186 MIR222-201ENST00000384992 110 ntBASIC0.83□□□□□ -2.28
CRXO43186 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.83□□□□□ -2.28
CRXO43186 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.83□□□□□ -2.28
CRXO43186 RPL23AP95-201ENST00000426806 265 ntBASIC0.83□□□□□ -2.28
CRXO43186 AC002486.1-201ENST00000435098 391 ntBASIC0.83□□□□□ -2.28
CRXO43186 UBE2D3P4-201ENST00000441973 436 ntBASIC0.83□□□□□ -2.28
CRXO43186 TAF9P1-201ENST00000445421 515 ntBASIC0.83□□□□□ -2.28
CRXO43186 MTCYBP1-201ENST00000454315 1119 ntBASIC0.83□□□□□ -2.28
CRXO43186 TAF9P2-201ENST00000454958 515 ntBASIC0.83□□□□□ -2.28
CRXO43186 AC008628.2-201ENST00000502605 298 ntBASIC0.83□□□□□ -2.28
CRXO43186 AC093852.1-201ENST00000503587 266 ntBASIC0.83□□□□□ -2.28
CRXO43186 AC067942.3-201ENST00000512025 362 ntBASIC0.83□□□□□ -2.28
CRXO43186 Vault.3-201ENST00000516676 95 ntBASIC0.83□□□□□ -2.28
CRXO43186 RNU6-567P-201ENST00000516746 107 ntBASIC0.83□□□□□ -2.28
CRXO43186 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.83□□□□□ -2.28
CRXO43186 MIR4295-201ENST00000585286 85 ntBASIC0.83□□□□□ -2.28
CRXO43186 VN1R107P-201ENST00000601784 209 ntBASIC0.83□□□□□ -2.28
CRXO43186 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.83□□□□□ -2.28
CRXO43186 AL078595.3-201ENST00000623815 1166 ntBASIC0.83□□□□□ -2.28
CRXO43186 MIR338-201ENST00000636369 67 ntBASIC0.83□□□□□ -2.28
CRXO43186 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CRXO43186 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
CRXO43186 AL391987.6-201ENST00000305671 199 ntBASIC0.82□□□□□ -2.28
CRXO43186 RNU6-500P-201ENST00000362349 107 ntBASIC0.82□□□□□ -2.28
CRXO43186 RNU1-124P-201ENST00000363861 145 ntBASIC0.82□□□□□ -2.28
CRXO43186 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
CRXO43186 RNU6-1093P-201ENST00000391194 107 ntBASIC0.82□□□□□ -2.28
CRXO43186 AL117339.3-201ENST00000418733 162 ntBASIC0.82□□□□□ -2.28
CRXO43186 AC073614.1-201ENST00000438690 650 ntBASIC0.82□□□□□ -2.28
CRXO43186 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.82□□□□□ -2.28
CRXO43186 Z73417.1-201ENST00000447373 778 ntBASIC0.82□□□□□ -2.28
CRXO43186 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.82□□□□□ -2.28
CRXO43186 SNORD116-28-201ENST00000516123 91 ntBASIC0.82□□□□□ -2.28
CRXO43186 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.82□□□□□ -2.28
CRXO43186 AC136932.1-201ENST00000574771 208 ntBASIC0.82□□□□□ -2.28
CRXO43186 AL391646.1-201ENST00000603860 190 ntBASIC0.82□□□□□ -2.28
CRXO43186 AC009994.1-201ENST00000606889 253 ntBASIC0.82□□□□□ -2.28
CRXO43186 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.82□□□□□ -2.28
CRXO43186 BX322639.1-202ENST00000423987 2213 ntBASIC0.82□□□□□ -2.28
CRXO43186 AC106754.1-201ENST00000562632 1513 ntBASIC0.82□□□□□ -2.28
CRXO43186 SNORA33-201ENST00000363664 130 ntBASIC0.81□□□□□ -2.28
CRXO43186 RNY4P34-201ENST00000364779 95 ntBASIC0.81□□□□□ -2.28
CRXO43186 Y_RNA.598-201ENST00000410480 95 ntBASIC0.81□□□□□ -2.28
CRXO43186 AC106883.1-201ENST00000418805 562 ntBASIC0.81□□□□□ -2.28
CRXO43186 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.81□□□□□ -2.28
CRXO43186 AC012306.1-201ENST00000423267 114 ntBASIC0.81□□□□□ -2.28
CRXO43186 AC010099.3-201ENST00000423896 409 ntBASIC0.81□□□□□ -2.28
CRXO43186 Z82205.1-201ENST00000428456 297 ntBASIC0.81□□□□□ -2.28
CRXO43186 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.81□□□□□ -2.28
CRXO43186 PRPS1P1-201ENST00000445305 876 ntBASIC0.81□□□□□ -2.28
CRXO43186 RPS23P4-201ENST00000487908 423 ntBASIC0.81□□□□□ -2.28
CRXO43186 HMGN1P12-201ENST00000499125 195 ntBASIC0.81□□□□□ -2.28
CRXO43186 RNA5SP458-201ENST00000516188 119 ntBASIC0.81□□□□□ -2.28
CRXO43186 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
CRXO43186 RNU6-311P-201ENST00000516224 102 ntBASIC0.81□□□□□ -2.28
CRXO43186 AP003461.1-201ENST00000528866 78 ntBASIC0.81□□□□□ -2.28
CRXO43186 MTND1P8-201ENST00000571424 950 ntBASIC0.81□□□□□ -2.28
CRXO43186 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.81□□□□□ -2.28
CRXO43186 MIR4775-201ENST00000581168 75 ntBASIC0.81□□□□□ -2.28
CRXO43186 AC064807.4-201ENST00000607201 407 ntBASIC0.81□□□□□ -2.28
CRXO43186 AC012676.2-201ENST00000619258 186 ntBASIC0.81□□□□□ -2.28
CRXO43186 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.81□□□□□ -2.28
CRXO43186 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.81□□□□□ -2.28
CRXO43186 SNORA29-201ENST00000384183 140 ntBASIC0.8□□□□□ -2.28
CRXO43186 RNU6-393P-201ENST00000384475 107 ntBASIC0.8□□□□□ -2.28
CRXO43186 SNORD70.1-201ENST00000391007 85 ntBASIC0.8□□□□□ -2.28
CRXO43186 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
CRXO43186 AC090960.1-201ENST00000421072 306 ntBASIC0.8□□□□□ -2.28
CRXO43186 HSFY7P-201ENST00000432672 318 ntBASIC0.8□□□□□ -2.28
CRXO43186 HSFY8P-201ENST00000437934 318 ntBASIC0.8□□□□□ -2.28
CRXO43186 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.8□□□□□ -2.28
CRXO43186 AC016717.1-201ENST00000448918 286 ntBASIC0.8□□□□□ -2.28
CRXO43186 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.8□□□□□ -2.28
CRXO43186 ARL2BPP4-201ENST00000506854 471 ntBASIC0.8□□□□□ -2.28
CRXO43186 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.8□□□□□ -2.28
CRXO43186 RNU6-410P-201ENST00000517006 107 ntBASIC0.8□□□□□ -2.28
CRXO43186 SNORA70.22-201ENST00000517160 124 ntBASIC0.8□□□□□ -2.28
CRXO43186 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms