Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.66□□□□□ -2.14
MSH4O15457 MIR3923-201ENST00000579521 83 ntBASIC1.66□□□□□ -2.14
MSH4O15457 CYP2C61P-201ENST00000604072 290 ntBASIC1.66□□□□□ -2.14
MSH4O15457 AP001836.1-201ENST00000604675 523 ntBASIC1.66□□□□□ -2.14
MSH4O15457 snoU13.31-201ENST00000607291 104 ntBASIC1.66□□□□□ -2.14
MSH4O15457 AC103591.3-201ENST00000608684 209 ntBASIC1.66□□□□□ -2.14
MSH4O15457 AC139792.3-201ENST00000623525 224 ntBASIC1.66□□□□□ -2.14
MSH4O15457 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.66□□□□□ -2.14
MSH4O15457 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.66□□□□□ -2.14
MSH4O15457 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
MSH4O15457 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
MSH4O15457 RNU6-26P-201ENST00000383985 107 ntBASIC1.65□□□□□ -2.15
MSH4O15457 RNU6-1042P-201ENST00000384204 107 ntBASIC1.65□□□□□ -2.15
MSH4O15457 MIR320A-201ENST00000385302 82 ntBASIC1.65□□□□□ -2.15
MSH4O15457 SNORD73A-201ENST00000386062 65 ntBASIC1.65□□□□□ -2.15
MSH4O15457 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
MSH4O15457 RNU6-1106P-201ENST00000390845 107 ntBASIC1.65□□□□□ -2.15
MSH4O15457 MTCYBP2-201ENST00000407745 171 ntBASIC1.65□□□□□ -2.15
MSH4O15457 AL663109.1-201ENST00000411498 844 ntBASIC1.65□□□□□ -2.15
MSH4O15457 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.65□□□□□ -2.15
MSH4O15457 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.65□□□□□ -2.15
MSH4O15457 HMGN2P18-201ENST00000450680 270 ntBASIC1.65□□□□□ -2.15
MSH4O15457 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.65□□□□□ -2.15
MSH4O15457 RNU6-333P-201ENST00000459117 107 ntBASIC1.65□□□□□ -2.15
MSH4O15457 RNA5SP57-201ENST00000459463 123 ntBASIC1.65□□□□□ -2.15
MSH4O15457 MTCO3P38-201ENST00000468910 766 ntBASIC1.65□□□□□ -2.15
MSH4O15457 AC132942.1-201ENST00000486753 483 ntBASIC1.65□□□□□ -2.15
MSH4O15457 SNORA14.1-201ENST00000516113 141 ntBASIC1.65□□□□□ -2.15
MSH4O15457 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.65□□□□□ -2.15
MSH4O15457 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.65□□□□□ -2.15
MSH4O15457 AC109446.1-201ENST00000566172 220 ntBASIC1.65□□□□□ -2.15
MSH4O15457 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
MSH4O15457 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.65□□□□□ -2.15
MSH4O15457 AC078795.3-201ENST00000602913 472 ntBASIC1.65□□□□□ -2.15
MSH4O15457 AC017083.3-201ENST00000609955 700 ntBASIC1.65□□□□□ -2.15
MSH4O15457 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
MSH4O15457 RNU6-23P-201ENST00000363283 107 ntBASIC1.64□□□□□ -2.15
MSH4O15457 RNU4-75P-201ENST00000364621 146 ntBASIC1.64□□□□□ -2.15
MSH4O15457 Y_RNA.409-201ENST00000383990 98 ntBASIC1.64□□□□□ -2.15
MSH4O15457 RNU6-160P-201ENST00000384591 107 ntBASIC1.64□□□□□ -2.15
MSH4O15457 SNORA26.3-201ENST00000391119 136 ntBASIC1.64□□□□□ -2.15
MSH4O15457 FGF7P8-201ENST00000402994 292 ntBASIC1.64□□□□□ -2.15
MSH4O15457 AL356432.1-201ENST00000405809 419 ntBASIC1.64□□□□□ -2.15
MSH4O15457 RNA5SP501-201ENST00000410990 112 ntBASIC1.64□□□□□ -2.15
MSH4O15457 AP1B1P2-201ENST00000416196 106 ntBASIC1.64□□□□□ -2.15
MSH4O15457 EIF4EP2-201ENST00000422816 654 ntBASIC1.64□□□□□ -2.15
MSH4O15457 DLGAP5P1-201ENST00000430307 464 ntBASIC1.64□□□□□ -2.15
MSH4O15457 MTCO2P3-201ENST00000442543 421 ntBASIC1.64□□□□□ -2.15
MSH4O15457 MTND1P29-201ENST00000448112 647 ntBASIC1.64□□□□□ -2.15
MSH4O15457 TPTE2P5-203ENST00000458118 728 ntBASIC1.64□□□□□ -2.15
MSH4O15457 RNU7-95P-201ENST00000459222 64 ntBASIC1.64□□□□□ -2.15
MSH4O15457 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.64□□□□□ -2.15
MSH4O15457 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
MSH4O15457 RNA5SP401-201ENST00000515920 127 ntBASIC1.64□□□□□ -2.15
MSH4O15457 RNU6-189P-201ENST00000516120 101 ntBASIC1.64□□□□□ -2.15
MSH4O15457 RNU6-1038P-201ENST00000516516 104 ntBASIC1.64□□□□□ -2.15
MSH4O15457 AP005639.2-201ENST00000527592 928 ntBASIC1.64□□□□□ -2.15
MSH4O15457 AP003034.1-201ENST00000534621 422 ntBASIC1.64□□□□□ -2.15
MSH4O15457 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.64□□□□□ -2.15
MSH4O15457 NBR2-204ENST00000587322 63 ntBASIC1.64□□□□□ -2.15
MSH4O15457 BNIP3P25-201ENST00000596023 559 ntBASIC1.64□□□□□ -2.15
MSH4O15457 AP001330.5-201ENST00000607176 411 ntBASIC1.64□□□□□ -2.15
MSH4O15457 AC245008.1-201ENST00000608123 476 ntBASIC1.64□□□□□ -2.15
MSH4O15457 AC093783.1-201ENST00000612976 329 ntBASIC1.64□□□□□ -2.15
MSH4O15457 U1.36-201ENST00000620684 176 ntBASIC1.64□□□□□ -2.15
MSH4O15457 AC130454.1-201ENST00000622948 401 ntBASIC1.64□□□□□ -2.15
MSH4O15457 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
MSH4O15457 RNA5SP201-201ENST00000410316 124 ntBASIC1.63□□□□□ -2.15
MSH4O15457 AP000275.1-201ENST00000411943 390 ntBASIC1.63□□□□□ -2.15
MSH4O15457 UBE2V1P4-201ENST00000425374 344 ntBASIC1.63□□□□□ -2.15
MSH4O15457 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.63□□□□□ -2.15
MSH4O15457 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.63□□□□□ -2.15
MSH4O15457 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.63□□□□□ -2.15
MSH4O15457 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.63□□□□□ -2.15
MSH4O15457 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.63□□□□□ -2.15
MSH4O15457 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.63□□□□□ -2.15
MSH4O15457 RPL39P5-202ENST00000512505 151 ntBASIC1.63□□□□□ -2.15
MSH4O15457 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
MSH4O15457 AC092747.3-201ENST00000603769 301 ntBASIC1.63□□□□□ -2.15
MSH4O15457 AC080013.6-201ENST00000606185 215 ntBASIC1.63□□□□□ -2.15
MSH4O15457 RMST_6.1-201ENST00000611980 203 ntBASIC1.63□□□□□ -2.15
MSH4O15457 Z99129.1-201ENST00000612510 255 ntBASIC1.63□□□□□ -2.15
MSH4O15457 AC048344.4-201ENST00000619744 527 ntBASIC1.63□□□□□ -2.15
MSH4O15457 U3.9-201ENST00000363823 204 ntBASIC1.62□□□□□ -2.15
MSH4O15457 RNU4-66P-201ENST00000365199 138 ntBASIC1.62□□□□□ -2.15
MSH4O15457 SNORA36A-201ENST00000384221 132 ntBASIC1.62□□□□□ -2.15
MSH4O15457 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.62□□□□□ -2.15
MSH4O15457 Z82205.1-201ENST00000428456 297 ntBASIC1.62□□□□□ -2.15
MSH4O15457 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.62□□□□□ -2.15
MSH4O15457 AC083798.1-201ENST00000472671 131 ntBASIC1.62□□□□□ -2.15
MSH4O15457 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
MSH4O15457 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.62□□□□□ -2.15
MSH4O15457 AC008628.2-201ENST00000502605 298 ntBASIC1.62□□□□□ -2.15
MSH4O15457 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.62□□□□□ -2.15
MSH4O15457 AC005741.1-201ENST00000511094 432 ntBASIC1.62□□□□□ -2.15
MSH4O15457 RNU6-1053P-201ENST00000515930 101 ntBASIC1.62□□□□□ -2.15
MSH4O15457 RNU6-405P-201ENST00000516637 110 ntBASIC1.62□□□□□ -2.15
MSH4O15457 CENPUP1-201ENST00000526649 1202 ntBASIC1.62□□□□□ -2.15
MSH4O15457 AC104383.1-201ENST00000530297 370 ntBASIC1.62□□□□□ -2.15
MSH4O15457 DNAJC19P9-201ENST00000555084 351 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms