Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.39□□□□□ -1.87
SHOXO15266 EIF4EP4-201ENST00000424916 578 ntBASIC3.39□□□□□ -1.87
SHOXO15266 Z98742.2-201ENST00000431564 187 ntBASIC3.39□□□□□ -1.87
SHOXO15266 RPS27P26-201ENST00000494583 239 ntBASIC3.39□□□□□ -1.87
SHOXO15266 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.39□□□□□ -1.87
SHOXO15266 RNA5SP519-201ENST00000516480 119 ntBASIC3.39□□□□□ -1.87
SHOXO15266 RN7SKP83-201ENST00000516512 178 ntBASIC3.39□□□□□ -1.87
SHOXO15266 AC022559.1-201ENST00000520905 205 ntBASIC3.39□□□□□ -1.87
SHOXO15266 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.39□□□□□ -1.87
SHOXO15266 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.39□□□□□ -1.87
SHOXO15266 AC103810.1-201ENST00000579873 453 ntBASIC3.39□□□□□ -1.87
SHOXO15266 MIR4715-201ENST00000584117 79 ntBASIC3.39□□□□□ -1.87
SHOXO15266 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.39□□□□□ -1.87
SHOXO15266 AL365265.1-201ENST00000621045 234 ntBASIC3.39□□□□□ -1.87
SHOXO15266 snoU18.1-201ENST00000629629 71 ntBASIC3.39□□□□□ -1.87
SHOXO15266 AC058791.1-201ENST00000608412 3198 ntBASIC3.39□□□□□ -1.87
SHOXO15266 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
SHOXO15266 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHOXO15266 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHOXO15266 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.39□□□□□ -1.87
SHOXO15266 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SHOXO15266 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SHOXO15266 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SHOXO15266 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SHOXO15266 MAPK10-362ENST00000641864 4484 ntBASIC3.38□□□□□ -1.87
SHOXO15266 RNU6-486P-201ENST00000363116 107 ntBASIC3.38□□□□□ -1.87
SHOXO15266 RNU6-774P-201ENST00000363238 107 ntBASIC3.38□□□□□ -1.87
SHOXO15266 SNORD87-201ENST00000364849 89 ntBASIC3.38□□□□□ -1.87
SHOXO15266 MIR23B-201ENST00000384832 97 ntBASIC3.38□□□□□ -1.87
SHOXO15266 RNU6-493P-201ENST00000391321 108 ntBASIC3.38□□□□□ -1.87
SHOXO15266 OOSP1P1-201ENST00000423265 274 ntBASIC3.38□□□□□ -1.87
SHOXO15266 RPS29P17-201ENST00000430795 166 ntBASIC3.38□□□□□ -1.87
SHOXO15266 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.38□□□□□ -1.87
SHOXO15266 RPS29P26-201ENST00000477483 171 ntBASIC3.38□□□□□ -1.87
SHOXO15266 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.38□□□□□ -1.87
SHOXO15266 AC006445.1-201ENST00000491925 405 ntBASIC3.38□□□□□ -1.87
SHOXO15266 AC026726.1-201ENST00000512859 601 ntBASIC3.38□□□□□ -1.87
SHOXO15266 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
SHOXO15266 RNA5SP380-201ENST00000517190 98 ntBASIC3.38□□□□□ -1.87
SHOXO15266 NDUFB9P3-201ENST00000521269 501 ntBASIC3.38□□□□□ -1.87
SHOXO15266 DEFB131C-201ENST00000528817 165 ntBASIC3.38□□□□□ -1.87
SHOXO15266 AC022655.2-201ENST00000577280 318 ntBASIC3.38□□□□□ -1.87
SHOXO15266 MIR3684-201ENST00000579779 74 ntBASIC3.38□□□□□ -1.87
SHOXO15266 MIR3133-201ENST00000583157 78 ntBASIC3.38□□□□□ -1.87
SHOXO15266 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.38□□□□□ -1.87
SHOXO15266 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.38□□□□□ -1.87
SHOXO15266 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHOXO15266 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.38□□□□□ -1.87
SHOXO15266 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SHOXO15266 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.38□□□□□ -1.87
SHOXO15266 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHOXO15266 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SHOXO15266 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.38□□□□□ -1.87
SHOXO15266 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SHOXO15266 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHOXO15266 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SHOXO15266 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SHOXO15266 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
SHOXO15266 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHOXO15266 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
SHOXO15266 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.37□□□□□ -1.87
SHOXO15266 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.37□□□□□ -1.87
SHOXO15266 AC093663.1-201ENST00000497190 394 ntBASIC3.37□□□□□ -1.87
SHOXO15266 RNU6-436P-201ENST00000516171 114 ntBASIC3.37□□□□□ -1.87
SHOXO15266 RNA5SP49-201ENST00000516450 115 ntBASIC3.37□□□□□ -1.87
SHOXO15266 RNU6-255P-201ENST00000516957 105 ntBASIC3.37□□□□□ -1.87
SHOXO15266 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
SHOXO15266 RPL30P11-203ENST00000598995 310 ntBASIC3.37□□□□□ -1.87
SHOXO15266 AC006133.1-201ENST00000617106 264 ntBASIC3.37□□□□□ -1.87
SHOXO15266 MIR6758-201ENST00000620653 63 ntBASIC3.37□□□□□ -1.87
SHOXO15266 MIR7703-201ENST00000620784 77 ntBASIC3.37□□□□□ -1.87
SHOXO15266 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SHOXO15266 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SHOXO15266 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SHOXO15266 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SHOXO15266 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.37□□□□□ -1.87
SHOXO15266 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SHOXO15266 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SHOXO15266 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SHOXO15266 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHOXO15266 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SHOXO15266 RNU6-454P-201ENST00000364292 107 ntBASIC3.36□□□□□ -1.87
SHOXO15266 SNORA48.7-201ENST00000391302 135 ntBASIC3.36□□□□□ -1.87
SHOXO15266 AL031003.1-201ENST00000404229 172 ntBASIC3.36□□□□□ -1.87
SHOXO15266 AL357139.1-201ENST00000407792 426 ntBASIC3.36□□□□□ -1.87
SHOXO15266 AL139281.1-201ENST00000422120 335 ntBASIC3.36□□□□□ -1.87
SHOXO15266 TRIAP1P1-201ENST00000427062 225 ntBASIC3.36□□□□□ -1.87
SHOXO15266 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.36□□□□□ -1.87
SHOXO15266 AL358232.1-201ENST00000448030 501 ntBASIC3.36□□□□□ -1.87
SHOXO15266 AC074290.1-201ENST00000448883 135 ntBASIC3.36□□□□□ -1.87
SHOXO15266 AC091021.1-201ENST00000468051 388 ntBASIC3.36□□□□□ -1.87
SHOXO15266 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.36□□□□□ -1.87
SHOXO15266 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.36□□□□□ -1.87
SHOXO15266 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.36□□□□□ -1.87
SHOXO15266 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.36□□□□□ -1.87
SHOXO15266 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.36□□□□□ -1.87
SHOXO15266 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.36□□□□□ -1.87
SHOXO15266 AL078604.3-201ENST00000615580 211 ntBASIC3.36□□□□□ -1.87
SHOXO15266 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SHOXO15266 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms