Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL159153.1-201ENST00000619688 317 ntBASIC1.95□□□□□ -2.1
CUX2O14529 Z69908.1-201ENST00000622603 247 ntBASIC1.95□□□□□ -2.1
CUX2O14529 MIR29B2-201ENST00000385055 81 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AC090960.1-201ENST00000421072 306 ntBASIC1.94□□□□□ -2.1
CUX2O14529 MTCO2P11-201ENST00000431069 680 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AC245102.2-201ENST00000448956 180 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AL353752.1-201ENST00000454946 260 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.94□□□□□ -2.1
CUX2O14529 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.94□□□□□ -2.1
CUX2O14529 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.94□□□□□ -2.1
CUX2O14529 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.94□□□□□ -2.1
CUX2O14529 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.94□□□□□ -2.1
CUX2O14529 RNU6-667P-201ENST00000517186 102 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.94□□□□□ -2.1
CUX2O14529 AC109479.2-201ENST00000517842 174 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.94□□□□□ -2.1
CUX2O14529 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.94□□□□□ -2.1
CUX2O14529 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.94□□□□□ -2.1
CUX2O14529 AL136363.2-201ENST00000604173 851 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AC109347.2-201ENST00000610220 349 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AC004908.3-201ENST00000610248 625 ntBASIC1.94□□□□□ -2.1
CUX2O14529 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AC080100.1-201ENST00000624239 5356 ntBASIC1.94□□□□□ -2.1
CUX2O14529 HMGN2P39-201ENST00000398005 273 ntBASIC1.94□□□□□ -2.1
CUX2O14529 Y_RNA.597-201ENST00000410463 100 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AL669831.1-202ENST00000428504 417 ntBASIC1.94□□□□□ -2.1
CUX2O14529 MTND4P32-201ENST00000437189 1237 ntBASIC1.94□□□□□ -2.1
CUX2O14529 GTF2IP13-201ENST00000438487 386 ntBASIC1.94□□□□□ -2.1
CUX2O14529 JTBP1-201ENST00000441314 247 ntBASIC1.94□□□□□ -2.1
CUX2O14529 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.94□□□□□ -2.1
CUX2O14529 RPS29P23-201ENST00000458635 123 ntBASIC1.94□□□□□ -2.1
CUX2O14529 SNRPGP7-201ENST00000469016 106 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AC090821.2-201ENST00000523552 176 ntBASIC1.94□□□□□ -2.1
CUX2O14529 MIR4287-201ENST00000579398 78 ntBASIC1.94□□□□□ -2.1
CUX2O14529 MIR3941-201ENST00000582572 103 ntBASIC1.94□□□□□ -2.1
CUX2O14529 RSL24D1P11-201ENST00000591045 491 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.94□□□□□ -2.1
CUX2O14529 MIR3974-201ENST00000637126 96 ntBASIC1.94□□□□□ -2.1
CUX2O14529 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.94□□□□□ -2.1
CUX2O14529 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CUX2O14529 ZNF702P-202ENST00000434269 1966 ntBASIC1.93□□□□□ -2.1
CUX2O14529 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CUX2O14529 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.93□□□□□ -2.1
CUX2O14529 Y_RNA.274-201ENST00000364714 101 ntBASIC1.93□□□□□ -2.1
CUX2O14529 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CUX2O14529 RNU6-611P-201ENST00000384276 104 ntBASIC1.93□□□□□ -2.1
CUX2O14529 MTATP6P18-201ENST00000417994 673 ntBASIC1.93□□□□□ -2.1
CUX2O14529 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.93□□□□□ -2.1
CUX2O14529 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.93□□□□□ -2.1
CUX2O14529 MTND3P5-201ENST00000512798 333 ntBASIC1.93□□□□□ -2.1
CUX2O14529 AC115990.1-201ENST00000526957 301 ntBASIC1.93□□□□□ -2.1
CUX2O14529 AP003392.2-201ENST00000527269 208 ntBASIC1.93□□□□□ -2.1
CUX2O14529 AC022616.8-201ENST00000533569 253 ntBASIC1.93□□□□□ -2.1
CUX2O14529 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.93□□□□□ -2.1
CUX2O14529 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.93□□□□□ -2.1
CUX2O14529 AC097372.5-201ENST00000623665 376 ntBASIC1.93□□□□□ -2.1
CUX2O14529 ZNF680P1-201ENST00000436625 1469 ntBASIC1.92□□□□□ -2.1
CUX2O14529 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CUX2O14529 SNORD115-3-201ENST00000363100 82 ntBASIC1.92□□□□□ -2.1
CUX2O14529 SNORA16B-201ENST00000364674 135 ntBASIC1.92□□□□□ -2.1
CUX2O14529 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
CUX2O14529 AL031667.1-201ENST00000440222 725 ntBASIC1.92□□□□□ -2.1
CUX2O14529 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.92□□□□□ -2.1
CUX2O14529 AC243964.1-201ENST00000441814 261 ntBASIC1.92□□□□□ -2.1
CUX2O14529 PMCHL2-203ENST00000457791 237 ntBASIC1.92□□□□□ -2.1
CUX2O14529 AP000763.2-201ENST00000540641 163 ntBASIC1.92□□□□□ -2.1
CUX2O14529 AC023050.3-201ENST00000541142 333 ntBASIC1.92□□□□□ -2.1
CUX2O14529 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.92□□□□□ -2.1
CUX2O14529 AC073648.5-201ENST00000603502 305 ntBASIC1.92□□□□□ -2.1
CUX2O14529 AC123912.5-201ENST00000605470 343 ntBASIC1.92□□□□□ -2.1
CUX2O14529 AL162373.1-201ENST00000620433 407 ntBASIC1.92□□□□□ -2.1
CUX2O14529 RNA5SP276-201ENST00000362580 94 ntBASIC1.91□□□□□ -2.1
CUX2O14529 RNU6-743P-201ENST00000364151 106 ntBASIC1.91□□□□□ -2.1
CUX2O14529 RNU6-1274P-201ENST00000384557 107 ntBASIC1.91□□□□□ -2.1
CUX2O14529 RNU6-903P-201ENST00000391270 109 ntBASIC1.91□□□□□ -2.1
CUX2O14529 SNORD56-201ENST00000413522 71 ntBASIC1.91□□□□□ -2.1
CUX2O14529 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.91□□□□□ -2.1
CUX2O14529 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.91□□□□□ -2.1
CUX2O14529 AL358176.2-201ENST00000425769 204 ntBASIC1.91□□□□□ -2.1
CUX2O14529 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.91□□□□□ -2.1
CUX2O14529 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.91□□□□□ -2.1
CUX2O14529 HMGB1P35-201ENST00000503360 598 ntBASIC1.91□□□□□ -2.1
CUX2O14529 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CUX2O14529 RNU5F-2P-201ENST00000516066 82 ntBASIC1.91□□□□□ -2.1
CUX2O14529 RNU6-965P-201ENST00000516721 96 ntBASIC1.91□□□□□ -2.1
CUX2O14529 RN7SKP256-201ENST00000517201 314 ntBASIC1.91□□□□□ -2.1
CUX2O14529 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.91□□□□□ -2.1
CUX2O14529 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.91□□□□□ -2.1
CUX2O14529 AL354950.2-201ENST00000617939 290 ntBASIC1.91□□□□□ -2.1
CUX2O14529 AC022418.1-201ENST00000624118 445 ntBASIC1.91□□□□□ -2.1
CUX2O14529 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CUX2O14529 RNU6-105P-201ENST00000363909 104 ntBASIC1.9□□□□□ -2.11
CUX2O14529 RNU6-944P-201ENST00000364023 107 ntBASIC1.9□□□□□ -2.11
CUX2O14529 RNU6-348P-201ENST00000384386 107 ntBASIC1.9□□□□□ -2.11
CUX2O14529 RNU6-1127P-201ENST00000384580 107 ntBASIC1.9□□□□□ -2.11
CUX2O14529 RNU11-3P-201ENST00000391111 133 ntBASIC1.9□□□□□ -2.11
CUX2O14529 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.9□□□□□ -2.11
CUX2O14529 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.9□□□□□ -2.11
CUX2O14529 RPL23AP6-201ENST00000446637 472 ntBASIC1.9□□□□□ -2.11
CUX2O14529 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms