Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.14□□□□□ -2.07
CLDN4O14493 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN4O14493 SNORD116-11-201ENST00000383882 92 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 MIR208B-201ENST00000401172 77 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 RNA5SP201-201ENST00000410316 124 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 RN7SKP223-201ENST00000410582 62 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN4O14493 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN4O14493 Z82205.1-201ENST00000428456 297 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 AL591806.2-201ENST00000433122 173 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.13□□□□□ -2.07
CLDN4O14493 MTND4LP16-201ENST00000440828 295 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CLDN4O14493 AL137159.1-201ENST00000452808 512 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN4O14493 PCMTD1P1-201ENST00000455560 355 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 PTP4A1P4-201ENST00000512479 322 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 RNA5SP137-201ENST00000516833 135 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.13□□□□□ -2.07
CLDN4O14493 AC087241.2-201ENST00000535801 324 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 SNRPGP18-201ENST00000553000 214 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 AC109446.1-201ENST00000566172 220 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 PCGEM1.1-201ENST00000613431 131 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 AC012640.5-201ENST00000623897 319 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 MIR1248-201ENST00000629190 106 ntBASIC2.13□□□□□ -2.07
CLDN4O14493 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN4O14493 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 RNU6-1013P-201ENST00000384180 107 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 RNU6-378P-201ENST00000384324 107 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 SNORA51.11-201ENST00000384442 131 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLDN4O14493 SNORD23.1-201ENST00000408212 104 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN4O14493 AC012306.1-201ENST00000423267 114 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 MTATP6P13-201ENST00000438531 667 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 FGF7P6-202ENST00000451282 293 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 PRELID3BP1-201ENST00000457142 540 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 snoU13.6-201ENST00000458785 104 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.12□□□□□ -2.07
CLDN4O14493 RNU4-49P-201ENST00000516080 140 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 AF235103.2-201ENST00000525753 346 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 AP003033.1-201ENST00000527244 415 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN4O14493 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN4O14493 MRPS36P4-201ENST00000534436 298 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.12□□□□□ -2.07
CLDN4O14493 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.12□□□□□ -2.07
CLDN4O14493 AC018638.8-201ENST00000588755 281 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 AC060780.3-201ENST00000589464 80 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 AP000654.2-201ENST00000605633 586 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 AC009248.2-201ENST00000619826 254 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 AL160394.1-201ENST00000624765 724 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 MTND5P6-201ENST00000422338 1798 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CLDN4O14493 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CLDN4O14493 AC005336.3-201ENST00000623833 2679 ntBASIC2.12□□□□□ -2.07
CLDN4O14493 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN4O14493 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN4O14493 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLDN4O14493 SNORD115-3-201ENST00000363100 82 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 U3.9-201ENST00000363823 204 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 RNU6-1286P-201ENST00000383871 107 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 RNU6-968P-201ENST00000384076 107 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 SNORA29-201ENST00000384183 140 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 MIR517A-201ENST00000385001 87 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLDN4O14493 RPL30P16-201ENST00000419341 429 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 WARS2P1-201ENST00000429678 537 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN4O14493 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.11□□□□□ -2.07
CLDN4O14493 RNU6-358P-201ENST00000516564 75 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 MIR514B-201ENST00000516774 80 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 RNU6-1088P-201ENST00000516850 104 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.11□□□□□ -2.07
CLDN4O14493 AC016256.1-201ENST00000547971 354 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.11□□□□□ -2.07
CLDN4O14493 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.11□□□□□ -2.07
CLDN4O14493 AC025754.2-201ENST00000606491 432 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
CLDN4O14493 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CLDN4O14493 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN4O14493 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLDN4O14493 Y_RNA.248-201ENST00000364501 109 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 RNU6-26P-201ENST00000383985 107 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 MIR221-201ENST00000385135 110 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 MIR1262-201ENST00000408276 93 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN4O14493 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.1□□□□□ -2.07
CLDN4O14493 AL353572.1-201ENST00000442490 417 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.1□□□□□ -2.07
CLDN4O14493 AC107032.1-201ENST00000485945 480 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 RNU6-991P-201ENST00000516168 107 ntBASIC2.1□□□□□ -2.07
CLDN4O14493 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms