Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.97□□□□□ -1.93
FOXN3O00409 AC021231.3-201ENST00000558497 370 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.97□□□□□ -1.93
FOXN3O00409 AC060766.3-201ENST00000591442 263 ntBASIC2.97□□□□□ -1.93
FOXN3O00409 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXN3O00409 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
FOXN3O00409 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.97□□□□□ -1.93
FOXN3O00409 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
FOXN3O00409 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
FOXN3O00409 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.96□□□□□ -1.94
FOXN3O00409 ZNF72P-201ENST00000425869 1908 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 MIR26A1-201ENST00000362205 77 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 Y_RNA.252-201ENST00000364556 101 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 RNU6-1286P-201ENST00000383871 107 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 SNORA41-201ENST00000384675 132 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 MIR128-1-201ENST00000384921 82 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 RNU6-220P-201ENST00000390919 107 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 AL590556.1-201ENST00000423231 483 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.96□□□□□ -1.94
FOXN3O00409 RNA5SP76-201ENST00000516277 87 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 SNORA9.3-201ENST00000516383 129 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 MIR5696-201ENST00000578474 85 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 AC092447.9-201ENST00000603395 144 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 AL078605.1-201ENST00000603529 500 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 AL356280.1-201ENST00000603614 379 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 AL162373.1-201ENST00000620433 407 ntBASIC2.96□□□□□ -1.94
FOXN3O00409 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.96□□□□□ -1.94
FOXN3O00409 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
FOXN3O00409 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
FOXN3O00409 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
FOXN3O00409 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.95□□□□□ -1.94
FOXN3O00409 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
FOXN3O00409 RNU6-490P-201ENST00000362985 107 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 CYCSP48-201ENST00000417124 323 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 AL358176.2-201ENST00000425769 204 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 AC096644.2-201ENST00000429278 159 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 SUMO1P4-201ENST00000429430 302 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 MICF-203ENST00000432679 129 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 AL445687.1-201ENST00000439946 251 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 AL135938.1-201ENST00000443141 297 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 AL513124.1-201ENST00000450410 614 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 snoU13.14-201ENST00000459372 104 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 AC022447.4-201ENST00000504053 364 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 SNORA25.10-201ENST00000515926 124 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 SNORD116.3-201ENST00000517176 78 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 AC016256.1-201ENST00000547971 354 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 MIR3136-201ENST00000583498 78 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 RPL12P50-201ENST00000603116 116 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 7SK.7-201ENST00000603504 247 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 Z98751.3-201ENST00000604447 521 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.95□□□□□ -1.94
FOXN3O00409 ZNF299P-201ENST00000406845 1804 ntBASIC2.95□□□□□ -1.94
FOXN3O00409 AP000560.1-201ENST00000624150 1937 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 Y_RNA.133-201ENST00000363428 110 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 Y_RNA.158-201ENST00000363651 101 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 RNU1-112P-201ENST00000364401 164 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 Y_RNA.314-201ENST00000365114 102 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 Y_RNA.428-201ENST00000384078 102 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 MIR208B-201ENST00000401172 77 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 CBX3P9-201ENST00000402326 552 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 U6atac.2-201ENST00000408644 118 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.94□□□□□ -1.94
FOXN3O00409 AC112220.1-201ENST00000434628 355 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 Z82188.1-201ENST00000436709 154 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 AC011816.1-201ENST00000441346 546 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 AC087477.1-201ENST00000465747 340 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 AC068781.1-201ENST00000488231 618 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 AC145146.1-201ENST00000496370 254 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.94□□□□□ -1.94
FOXN3O00409 RNU6-764P-201ENST00000516396 105 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 RNU6-264P-201ENST00000517134 104 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 AC008269.2-201ENST00000561915 1105 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXN3O00409 AC093732.2-201ENST00000607950 274 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 AL450472.1-202ENST00000637286 180 ntBASIC2.94□□□□□ -1.94
FOXN3O00409 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.94□□□□□ -1.94
FOXN3O00409 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.94□□□□□ -1.94
FOXN3O00409 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
FOXN3O00409 AC091812.1-201ENST00000432235 1948 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.93□□□□□ -1.94
FOXN3O00409 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.93□□□□□ -1.94
FOXN3O00409 RNU1-72P-201ENST00000362976 153 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 RNY1P16-201ENST00000363063 111 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 RNU6-99P-201ENST00000364721 107 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 Y_RNA.557-201ENST00000384680 107 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 MIR568-201ENST00000385036 95 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 AL138827.1-201ENST00000402666 306 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 RNU6-985P-201ENST00000410182 104 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXN3O00409 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.93□□□□□ -1.94
FOXN3O00409 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.93□□□□□ -1.94
FOXN3O00409 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.93□□□□□ -1.94
FOXN3O00409 RPL23AP75-201ENST00000491601 451 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 AF186996.7-201ENST00000492781 209 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.93□□□□□ -1.94
FOXN3O00409 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
FOXN3O00409 AC079600.2-201ENST00000550076 130 ntBASIC2.93□□□□□ -1.94
FOXN3O00409 MIR3923-201ENST00000579521 83 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms