Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-481P-201ENST00000384194 107 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 RPS20P2-201ENST00000402520 389 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 MTCO2P18-201ENST00000457151 658 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 SUMO2P5-201ENST00000506790 245 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU4-77P-201ENST00000516692 156 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR3146-201ENST00000580367 79 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 AL606834.3-201ENST00000602615 496 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 SEPT14P17-201ENST00000617978 177 ntBASIC-0.35□□□□□ -2.47
CHKB-CPT1BH3BT56 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU1-76P-201ENST00000362903 159 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-707P-201ENST00000364647 95 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR573-201ENST00000384964 99 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR1305-201ENST00000408300 86 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR1827-201ENST00000408549 66 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 RN7SKP266-201ENST00000410232 287 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 RPL18AP17-201ENST00000455326 198 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 AC108729.2-201ENST00000476543 840 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 AL031667.3-201ENST00000620124 655 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 SNORD98-201ENST00000636377 67 ntBASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR18A-201ENST00000362310 71 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 SNORA2.2-201ENST00000365473 135 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-700P-201ENST00000391043 107 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 RNA5SP201-201ENST00000410316 124 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 SNORA40.8-201ENST00000411034 126 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 SNORD71-201ENST00000411292 86 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 TIMM9P3-201ENST00000428659 274 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 MTND1P20-201ENST00000430341 950 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 AC026414.1-201ENST00000504046 698 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 MTCO3P9-201ENST00000506989 781 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 RPL23AP94-201ENST00000512518 302 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU2-34P-201ENST00000516534 121 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 AC112693.2-201ENST00000556538 232 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-94P-201ENST00000607728 107 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR6798-201ENST00000612887 67 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 AC015726.2-201ENST00000620112 122 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR8054-201ENST00000620877 86 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 AC131159.1-201ENST00000621854 213 ntBASIC-0.37□□□□□ -2.47
CHKB-CPT1BH3BT56 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 RNY4P16-201ENST00000364768 94 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 AL158050.1-201ENST00000416077 457 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 MTATP6P16-201ENST00000434543 526 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 RPL37P21-201ENST00000435890 276 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 AL139824.2-201ENST00000458731 1095 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 AC007547.1-201ENST00000462177 490 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 RPS3AP17-201ENST00000472594 777 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 AL163973.1-201ENST00000484753 577 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 AC109445.1-201ENST00000512356 383 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 AC104136.1-201ENST00000512969 394 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 SNORA25.12-201ENST00000516202 82 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 SNORA40.12-201ENST00000516329 111 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 AC122134.1-202ENST00000569111 1201 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR4789-201ENST00000577469 82 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR4778-201ENST00000577635 80 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR5190-201ENST00000581537 80 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR4452-201ENST00000583004 71 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 AC022217.4-201ENST00000604389 163 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR15A-201ENST00000607334 83 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 MTND5P33-201ENST00000571250 1450 ntBASIC-0.38□□□□□ -2.47
CHKB-CPT1BH3BT56 RNA5SP517-201ENST00000364724 117 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR544A-201ENST00000384855 91 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR644A-201ENST00000385262 94 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AL596276.1-201ENST00000434465 418 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 SEPT7P4-201ENST00000437076 306 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 STAG3L5P-204ENST00000443759 179 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 MTCO2P7-201ENST00000446518 666 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 TPT1P7-201ENST00000458300 517 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 LINC01399-202ENST00000458450 244 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AF235103.2-201ENST00000525753 346 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AP003716.2-201ENST00000528260 108 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AL137100.2-201ENST00000555786 315 ntBASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.39□□□□□ -2.47
CHKB-CPT1BH3BT56 MIR4498-201ENST00000577599 66 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms